6FH8

E. coli surface display of streptavidin for directed evolution of an allylic deallocase


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP42932.0 M ammonium sulfate, 0.1 M sodium acetate, pH 4.0
Crystal Properties
Matthews coefficientSolvent content
2.3146.74

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 57.722α = 90
b = 57.722β = 90
c = 183.615γ = 90
Symmetry
Space GroupI 41 2 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS PILATUS 2M2016-11-19MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSLS BEAMLINE X06DA1.0000SLSX06DA

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.6445.898.326.915.719391
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.641.66

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONTHROUGHOUT1.6445.81841595298.060.122080.120160.15905RANDOM26.139
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.33-0.330.65
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg29.985
r_sphericity_free28.615
r_dihedral_angle_4_deg21.073
r_sphericity_bonded15.088
r_dihedral_angle_3_deg13.444
r_long_range_B_refined10.106
r_scbond_it7.006
r_dihedral_angle_1_deg6.945
r_rigid_bond_restr6.067
r_scangle_other5.993
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg29.985
r_sphericity_free28.615
r_dihedral_angle_4_deg21.073
r_sphericity_bonded15.088
r_dihedral_angle_3_deg13.444
r_long_range_B_refined10.106
r_scbond_it7.006
r_dihedral_angle_1_deg6.945
r_rigid_bond_restr6.067
r_scangle_other5.993
r_long_range_B_other5.983
r_scbond_other5.783
r_mcangle_it4.65
r_mcangle_other4.646
r_mcbond_it3.986
r_mcbond_other3.96
r_angle_refined_deg2.312
r_angle_other_deg1.192
r_chiral_restr0.144
r_bond_refined_d0.03
r_gen_planes_refined0.011
r_gen_planes_other0.003
r_bond_other_d0.002
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms934
Nucleic Acid Atoms
Solvent Atoms79
Heterogen Atoms41

Software

Software
Software NamePurpose
REFMACrefinement
XDSdata reduction
Aimlessdata scaling
REFMACphasing