6Z40

NMR solution structure of the carbohydrate-binding module family 5 (CBM5) from Cellvibrio japonicus CjLPMO10A

SOLUTION NMR

NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	0.1 mM [U-15N] CBM5, 25 mM sodium phosphate, 10 mM sodium chloride	90% H2O/10% D2O	55 mM	5.5	1 atm	298	Bruker AVANCE III 800
2	3D HNCA	0.1 mM [U-13C; U-15N] CBM5, 25 mM sodium phosphate, 10 mM sodium chloride	90% H2O/10% D2O	55 mM	5.5	1 atm	298	Bruker AVANCE III 800
3	3D HN(CO)CA	0.1 mM [U-13C; U-15N] CBM5, 25 mM sodium phosphate, 10 mM sodium chloride	90% H2O/10% D2O	55 mM	5.5	1 atm	298	Bruker AVANCE III 800
4	3D HNCO	0.1 mM [U-13C; U-15N] CBM5, 25 mM sodium phosphate, 10 mM sodium chloride	90% H2O/10% D2O	55 mM	5.5	1 atm	298	Bruker AVANCE III 800
5	3D CBCA(CO)NH	0.1 mM [U-13C; U-15N] CBM5, 25 mM sodium phosphate, 10 mM sodium chloride	90% H2O/10% D2O	55 mM	5.5	1 atm	298	Bruker AVANCE III 800
6	2D 1H-13C HSQC aliphatic	0.1 mM [U-13C; U-15N] CBM5, 25 mM sodium phosphate, 10 mM sodium chloride	90% H2O/10% D2O	55 mM	5.5	1 atm	298	Bruker AVANCE III 800
7	2D 1H-13C HSQC aromatic	0.1 mM [U-13C; U-15N] CBM5, 25 mM sodium phosphate, 10 mM sodium chloride	90% H2O/10% D2O	55 mM	5.5	1 atm	298	Bruker AVANCE III 800
8	3D HCCH-TOCSY	0.1 mM [U-13C; U-15N] CBM5, 25 mM sodium phosphate, 10 mM sodium chloride	90% H2O/10% D2O	55 mM	5.5	1 atm	298	Bruker AVANCE III 800
9	3D 1H-13C NOESY aliphatic	0.1 mM [U-13C; U-15N] CBM5, 25 mM sodium phosphate, 10 mM sodium chloride	90% H2O/10% D2O	55 mM	5.5	1 atm	298	Bruker AVANCE III 800
10	3D 1H-13C NOESY aromatic	0.1 mM [U-13C; U-15N] CBM5, 25 mM sodium phosphate, 10 mM sodium chloride	90% H2O/10% D2O	55 mM	5.5	1 atm	298	Bruker AVANCE III 800
11	3D 1H-15N NOESY	0.1 mM [U-15N] CBM5, 25 mM sodium phosphate, 10 mM sodium chloride	90% H2O/10% D2O	55 mM	5.5	1 atm	298	Bruker AVANCE III 800
12	2D 1H-1H NOESY	0.1 mM CBM5, 25 mM sodium phosphate, 10 mM sodium chloride	90% H2O/10% D2O	55 mM	5.5	1 atm	298	Bruker AVANCE III 800
13	3D HN(CA)CO	0.1 mM [U-13C; U-15N] CBM5, 25 mM sodium phosphate, 10 mM sodium chloride	90% H2O/10% D2O	55 mM	5.5	1 atm	298	Bruker AVANCE III 800

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE III	800

NMR Refinement
Method	Details	Software
simulated annealing		CYANA
molecular dynamics		YASARA

NMR Ensemble Information
Conformer Selection Criteria	target function
Conformers Calculated Total Number	100
Conformers Submitted Total Number	20
Representative Model	1 (target function)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	processing	TopSpin	3.5	Bruker Biospin
2	chemical shift assignment	CARA	1.5.5	Keller and Wuthrich
5	structure calculation	CYANA	3.98.13	Guntert, Mumenthaler and Wuthrich
3	refinement	YASARA	14.6.23	Elmar Krieger, Keehyoung Joo, Jinwoo Lee,3 Jooyoung Lee, Srivatsan Raman, James Thompson, Mike Tyka, David Baker, and Kevin Karplus

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.