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Structure of Human Dispatched-1 (DISP1)
Refinement RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.708 r_dihedral_angle_3_deg 16.213 r_dihedral_angle_4_deg 10.071 r_long_range_B_refined 8.923 r_long_range_B_other 8.922 r_dihedral_angle_1_deg 6.486 r_mcangle_it 3.956 r_mcangle_other 3.956 r_scangle_other 2.652 r_mcbond_it 2.133
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.708 r_dihedral_angle_3_deg 16.213 r_dihedral_angle_4_deg 10.071 r_long_range_B_refined 8.923 r_long_range_B_other 8.922 r_dihedral_angle_1_deg 6.486 r_mcangle_it 3.956 r_mcangle_other 3.956 r_scangle_other 2.652 r_mcbond_it 2.133 r_mcbond_other 2.133 r_scbond_it 1.3 r_scbond_other 1.3 r_angle_refined_deg 1.292 r_angle_other_deg 1.058 r_chiral_restr 0.069 r_bond_refined_d 0.01 r_bond_other_d 0.005 r_gen_planes_refined 0.004 r_gen_planes_other 0.002 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Sample Human dispatched-1 in complex with dual-lipidated SHH-N
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument FEI VITROBOT MARK IV Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 400432 Reported Resolution (Å) 4.53 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT
Map-Model Fitting and Refinement Id 1 Refinement Space Refinement Protocol Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type GATAN K3 (6k x 4k) Electron Dose (electrons/Å**2) 62
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model FEI TITAN KRIOS Minimum Defocus (nm) Maximum Defocus (nm) Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS Imaging Mode DARK FIELD Specimen Holder Model Nominal Magnification Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version CLASSIFICATION RELION
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING ONLY