6TF4

Solution structure of RfaH C-terminal domain from Vibrio cholerae


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC0.5 mM [U-99% 13C; U-99% 15N] Vibrio cholerae RfaH C-terminal domain, 20 mM sodium phosphate, 100 mM sodium chloride90% H2O/10% D2O136 mM6.51 atm298Bruker AVANCE 600
22D 1H-13C ctHSQC aliphatic0.5 mM [U-99% 13C; U-99% 15N] Vibrio cholerae RfaH C-terminal domain, 10 mM potassium phosphate, 50 mM potassium chloride90% H2O/10% D2O98 mM7.51 atm298Bruker Ascend Aeon 900
32D 1H-13C HSQC aromatic0.5 mM [U-99% 13C; U-99% 15N] Vibrio cholerae RfaH C-terminal domain, 10 mM potassium phosphate, 50 mM potassium chloride90% H2O/10% D2O98 mM7.51 atm298Bruker AVANCE 700
43D HNCO0.5 mM [U-99% 13C; U-99% 15N] Vibrio cholerae RfaH C-terminal domain, 10 mM potassium phosphate, 50 mM potassium chloride90% H2O/10% D2O98 mM7.51 atm298Bruker AVANCE 700
53D HNCA0.5 mM [U-99% 13C; U-99% 15N] Vibrio cholerae RfaH C-terminal domain, 10 mM potassium phosphate, 50 mM potassium chloride90% H2O/10% D2O98 mM7.51 atm298Bruker AVANCE 700
63D HNCACB0.5 mM [U-99% 13C; U-99% 15N] Vibrio cholerae RfaH C-terminal domain, 20 mM sodium phosphate, 100 mM sodium chloride90% H2O/10% D2O136 mM6.51 atm298Bruker AVANCE 600
73D CBCA(CO)NH0.5 mM [U-99% 13C; U-99% 15N] Vibrio cholerae RfaH C-terminal domain, 20 mM sodium phosphate, 100 mM sodium chloride90% H2O/10% D2O136 mM6.51 atm298Bruker AVANCE 600
83D CCH-TOCSY0.5 mM [U-99% 13C; U-99% 15N] Vibrio cholerae RfaH C-terminal domain, 10 mM potassium phosphate, 50 mM potassium chloride90% H2O/10% D2O98 mM7.51 atm298Bruker AVANCE 600
93D HCCH-TOCSY0.5 mM [U-99% 13C; U-99% 15N] Vibrio cholerae RfaH C-terminal domain, 10 mM potassium phosphate, 50 mM potassium chloride90% H2O/10% D2O98 mM7.51 atm298Bruker AVANCE 600
103D HBHA(CO)NH0.5 mM [U-99% 13C; U-99% 15N] Vibrio cholerae RfaH C-terminal domain, 10 mM potassium phosphate, 50 mM potassium chloride90% H2O/10% D2O98 mM7.51 atm298Bruker Ascend Aeon 900
113D CACO0.5 mM [U-99% 13C; U-99% 15N] Vibrio cholerae RfaH C-terminal domain, 10 mM potassium phosphate, 50 mM potassium chloride90% H2O/10% D2O98 mM7.51 atm298Bruker AVANCE 700
123D CON0.5 mM [U-99% 13C; U-99% 15N] Vibrio cholerae RfaH C-terminal domain, 10 mM potassium phosphate, 50 mM potassium chloride90% H2O/10% D2O98 mM7.51 atm298Bruker AVANCE 700
133D 1H-13C NOESY aliphatic0.5 mM [U-99% 13C; U-99% 15N] Vibrio cholerae RfaH C-terminal domain, 10 mM potassium phosphate, 50 mM potassium chloride90% H2O/10% D2O98 mM7.51 atm298Bruker Ascend Aeon 900
143D 1H-13C NOESY aromatic0.5 mM [U-99% 13C; U-99% 15N] Vibrio cholerae RfaH C-terminal domain, 10 mM potassium phosphate, 50 mM potassium chloride90% H2O/10% D2O98 mM7.51 atm298Bruker Ascend Aeon 900
153D 1H-15N NOESY0.5 mM [U-99% 13C; U-99% 15N] Vibrio cholerae RfaH C-terminal domain, 10 mM potassium phosphate, 50 mM potassium chloride90% H2O/10% D2O98 mM7.51 atm298Bruker Ascend Aeon 900
163D C(CO)NH0.5 mM [U-99% 13C; U-99% 15N] Vibrio cholerae RfaH C-terminal domain, 20 mM sodium phosphate, 100 mM sodium chloride90% H2O/10% D2O136 mM6.51 atm298Bruker AVANCE 600
173D long range HNCO0.5 mM [U-99% 13C; U-99% 15N] Vibrio cholerae RfaH C-terminal domain, 10 mM potassium phosphate, 50 mM potassium chloride90% H2O/10% D2O98 mM7.51 atm298Bruker AVANCE 700
1813CO spinecho difference 13C ctHSQC0.5 mM [U-99% 13C; U-99% 15N] Vibrio cholerae RfaH C-terminal domain, 10 mM potassium phosphate, 50 mM potassium chloride90% H2O/10% D2O98 mM7.51 atm298Bruker AVANCE 700
1915N spinecho difference 13C ctHSQC0.5 mM [U-99% 13C; U-99% 15N] Vibrio cholerae RfaH C-terminal domain, 10 mM potassium phosphate, 50 mM potassium chloride90% H2O/10% D2O98 mM7.51 atm298Bruker AVANCE 700
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE600
2BrukerAVANCE700
3BrukerAscend Aeon900
NMR Refinement
MethodDetailsSoftware
simulated annealingFloating assignment of pro-chiral groupsX-PLOR NIH
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number80
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionTopSpinv3.5 pl5Bruker Biospin
2chemical shift assignmentNMRViewJv9.2.0-b2Johnson, One Moon Scientific
3data analysisNMRViewJv9.2.0-b2Johnson, One Moon Scientific
4peak pickingNMRViewJJohnson, One Moon Scientific
5structure calculationX-PLOR NIHv1.2.1Schwieters, Kuszewski, Tjandra and Clore