6R5G | pdb_00006r5g

C-SH2 domain of SHP-2 in complex with phospho-ITSM of PD-1

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	800 uM [U-13C; U-15N] C-SH2 domain of SHP-2, 1000 uM ITSM	90% H2O/10% D2O	150 mM	6.8	1 atm	298	Bruker AVANCE III HD 600
2	3D HNCO	800 uM [U-13C; U-15N] C-SH2 domain of SHP-2, 1000 uM ITSM	90% H2O/10% D2O	150 mM	6.8	1 atm	298	Bruker AVANCE III HD 600
3	3D HNCACB	800 uM [U-13C; U-15N] C-SH2 domain of SHP-2, 1000 uM ITSM	90% H2O/10% D2O	150 mM	6.8	1 atm	298	Bruker AVANCE III HD 600
4	3D HN(COCA)CB	800 uM [U-13C; U-15N] C-SH2 domain of SHP-2, 1000 uM ITSM	90% H2O/10% D2O	150 mM	6.8	1 atm	298	Bruker AVANCE III HD 600
5	3D HCCH-TOCSY	800 uM [U-13C; U-15N] C-SH2 domain of SHP-2, 1000 uM ITSM	90% H2O/10% D2O	150 mM	6.8	1 atm	298	Bruker AVANCE III HD 600
6	2D 1H-13C HSQC	800 uM [U-13C; U-15N] C-SH2 domain of SHP-2, 1000 uM ITSM	90% H2O/10% D2O	150 mM	6.8	1 atm	298	Bruker AVANCE III HD 600
7	3D NOESY-13C HSQC	800 uM [U-13C; U-15N] C-SH2 domain of SHP-2, 1000 uM ITSM	90% H2O/10% D2O	150 mM	6.8	1 atm	298	Bruker AVANCE III HD 850
8	3D 13C/15N-filtered NOESY-13C HSQC	800 uM [U-13C; U-15N] C-SH2 domain of SHP-2, 1000 uM ITSM	90% H2O/10% D2O	150 mM	6.8	1 atm	298	Bruker AVANCE III HD 600
9	2D 13C/15N-filtered 1H-1H NOESY	800 uM [U-13C; U-15N] C-SH2 domain of SHP-2, 640 uM ITSM	90% H2O/10% D2O	150 mM	6.8	1 atm	298	Bruker AVANCE III HD 600
10	2D 13C/15N-filtered 1H-1H TOCSY	800 uM [U-13C; U-15N] C-SH2 domain of SHP-2, 640 uM ITSM	90% H2O/10% D2O	150 mM	6.8	1 atm	298	Bruker AVANCE III HD 600
11	3D NOESY-15N HSQC	800 uM [U-13C; U-15N] C-SH2 domain of SHP-2, 1000 uM ITSM	90% H2O/10% D2O	150 mM	6.8	1 atm	298	Bruker AVANCE III HD 850

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE III HD	850
2	Bruker	AVANCE III HD	600

NMR Refinement
Method	Details	Software
simulated annealing-molecular dynamics	ARIA and CNS were used in combination	ARIA
simulated annealing-molecular dynamics	ARIA and CNS were used in combination	CNS

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	150
Conformers Submitted Total Number	10
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
2	collection	TopSpin		Bruker Biospin
3	peak picking	CcpNmr Analysis		CCPN
4	chemical shift assignment	CcpNmr Analysis		CCPN
5	structure calculation	ARIA		Linge, O'Donoghue and Nilges
6	structure calculation	CNS		Brunger, Adams, Clore, Gros, Nilges and Read
7	processing	NMRPipe		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax