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Near Atomic Structure of an Atadenovirus Shows a possible gene duplication event and Intergenera Variations in Cementing Proteins
Refinement RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 6.7843 f_angle_d 0.9774 f_chiral_restr 0.06 f_plane_restr 0.0073 f_bond_d 0.0064
Sample Lizard adenovirus 2
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 16071 Reported Resolution (Å) 3.4 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT Point Symmetry I
Map-Model Fitting and Refinement Id 1 Refinement Space Refinement Protocol Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type FEI FALCON II (4k x 4k) Electron Dose (electrons/Å**2) 54
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model FEI TITAN KRIOS Minimum Defocus (nm) Maximum Defocus (nm) Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS Imaging Mode BRIGHT FIELD Specimen Holder Model Nominal Magnification Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version PARTICLE SELECTION Scipion CTF CORRECTION CTFFIND CTF CORRECTION Scipion MODEL FITTING UCSF Chimera MODEL FITTING Scipion INITIAL EULER ASSIGNMENT RELION INITIAL EULER ASSIGNMENT Scipion FINAL EULER ASSIGNMENT RELION FINAL EULER ASSIGNMENT Scipion CLASSIFICATION RELION CLASSIFICATION Scipion RECONSTRUCTION RELION RECONSTRUCTION Scipion MODEL REFINEMENT Coot MODEL REFINEMENT PHENIX MODEL REFINEMENT REFMAC MODEL REFINEMENT Scipion
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING ONLY