6N68

NMR solution structure of Protonectin (Agelaia pallipes pallipes) interacting with SDS micelles: an antimicrobial peptide with anticancer activity on breast cancer cells


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-1H TOCSY1 mM Protonectin, 100 mM Perdeuterated SDS90% H2O/10% D2O5.01 atm298Varian UNITY 600
22D 1H-1H NOESY1 mM Protonectin, 100 mM Perdeuterated SDS90% H2O/10% D2O5.01 atm298Varian UNITY 600
32D DQF-COSY1 mM Protonectin, 100 mM Perdeuterated SDS90% H2O/10% D2O5.01 atm298Varian UNITY 600
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianUNITY600
NMR Refinement
MethodDetailsSoftware
torsion angle dynamicsCNS
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number40
Conformers Submitted Total Number20
Representative Model1 (target function)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1data analysisCARA1.9.1.7Keller and Wuthrich
2data analysisCANDIDHerrmann, Guntert and Wuthrich
3structure calculationCNSBrunger, Adams, Clore, Gros, Nilges and Read
4refinementGROMACSBerendsen, Herman