X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION27720% PEG 3350 200mM KH2PO4
Crystal Properties
Matthews coefficientSolvent content
2.2344.86

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 50.09α = 90
b = 63.62β = 90
c = 188.16γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS PILATUS3 6M2016-04-17MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONDIAMOND BEAMLINE I030.987DiamondI03

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
1294.0899.812.46.539393

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONTHROUGHOUT294.0839393207299.610.172980.170950.2122RANDOM32.557
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
2.730.02-2.75
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg34.588
r_dihedral_angle_4_deg18.285
r_dihedral_angle_3_deg13.951
r_long_range_B_other8.906
r_long_range_B_refined8.904
r_dihedral_angle_1_deg7.496
r_scangle_other6.96
r_scbond_it4.742
r_scbond_other4.735
r_mcangle_it4.059
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg34.588
r_dihedral_angle_4_deg18.285
r_dihedral_angle_3_deg13.951
r_long_range_B_other8.906
r_long_range_B_refined8.904
r_dihedral_angle_1_deg7.496
r_scangle_other6.96
r_scbond_it4.742
r_scbond_other4.735
r_mcangle_it4.059
r_mcangle_other4.059
r_mcbond_it3.035
r_mcbond_other3.035
r_angle_refined_deg0.691
r_angle_other_deg0.51
r_chiral_restr0.064
r_bond_refined_d0.01
r_bond_other_d0.003
r_gen_planes_refined0.003
r_gen_planes_other0.001
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms4206
Nucleic Acid Atoms
Solvent Atoms262
Heterogen Atoms110

Software

Software
Software NamePurpose
REFMACrefinement
XDSdata reduction
Aimlessdata scaling
MOLREPphasing