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Crystal Structure of JzTX-V
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 293 0.1 M sodium acetate, 1.5-2.0 M Ammonium Acetate
Crystal Properties Matthews coefficient Solvent content 1.82 32.23
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 37.16 α = 90 b = 37.16 β = 90 c = 64.605 γ = 120
Symmetry Space Group P 3 1 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD RAYONIX MX300-HS 2015-06-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 22-ID 0.9976 APS 22-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.05 32.31 100 0.06 0.064 0.024 0.999 15.4 7.6 24183
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.05 1.07 100 1.671 1.8 0.661 0.617 7.2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION AB INITIO PHASING THROUGHOUT 1.05 20 22986 1191 99.92 0.1908 0.1899 0.1895 0.2092 0.2079 RANDOM 14.695
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.1 -0.05 -0.1 0.34
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 44.98 r_dihedral_angle_4_deg 26.84 r_sphericity_free 24.456 r_sphericity_bonded 11.493 r_dihedral_angle_3_deg 10.919 r_dihedral_angle_1_deg 6.291 r_angle_other_deg 3.188 r_rigid_bond_restr 3.122 r_angle_refined_deg 2.254 r_chiral_restr 0.129
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 44.98 r_dihedral_angle_4_deg 26.84 r_sphericity_free 24.456 r_sphericity_bonded 11.493 r_dihedral_angle_3_deg 10.919 r_dihedral_angle_1_deg 6.291 r_angle_other_deg 3.188 r_rigid_bond_restr 3.122 r_angle_refined_deg 2.254 r_chiral_restr 0.129 r_gen_planes_other 0.066 r_bond_refined_d 0.034 r_bond_other_d 0.026 r_gen_planes_refined 0.014
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 496 Nucleic Acid Atoms Solvent Atoms 55 Heterogen Atoms 26
Software Software Software Name Purpose REFMAC refinement XDS data reduction Aimless data scaling PDB_EXTRACT data extraction ACORN phasing