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TPX2_mini decorated GMPCPP-microtubule
Refinement RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.097 r_dihedral_angle_3_deg 16.128 r_dihedral_angle_4_deg 12.079 r_dihedral_angle_1_deg 11.656 r_long_range_B_refined 3.785 r_long_range_B_other 3.785 r_mcangle_it 1.589 r_mcangle_other 1.589 r_angle_refined_deg 1.451 r_scangle_other 1.313
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.097 r_dihedral_angle_3_deg 16.128 r_dihedral_angle_4_deg 12.079 r_dihedral_angle_1_deg 11.656 r_long_range_B_refined 3.785 r_long_range_B_other 3.785 r_mcangle_it 1.589 r_mcangle_other 1.589 r_angle_refined_deg 1.451 r_scangle_other 1.313 r_angle_other_deg 0.967 r_mcbond_it 0.857 r_mcbond_other 0.857 r_scbond_it 0.68 r_scbond_other 0.68 r_chiral_restr 0.082 r_bond_refined_d 0.008 r_gen_planes_refined 0.005 r_bond_other_d 0.002 r_gen_planes_other 0.002 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Sample TPX2_mini decorated GMPCPP-microtubule Sample Components Tubulin Targeting protein for Xklp2
Specimen Preparation Sample Aggregation State HELICAL ARRAY Vitrification Instrument FEI VITROBOT MARK II Cryogen Name ETHANE Sample Vitrification Details blot for 4 seconds before plunging
3D Reconstruction Reconstruction Method HELICAL Number of Particles 85000 Reported Resolution (Å) 3.3 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type HELICAL Axial Symmetry C1 Axial Rise 9.03 Angular Rotation -25.74
Map-Model Fitting and Refinement Id 1 Refinement Space Refinement Protocol AB INITIO MODEL Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type GATAN K2 SUMMIT (4k x 4k) Electron Dose (electrons/Å**2) 27.6
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model FEI TITAN KRIOS Minimum Defocus (nm) Maximum Defocus (nm) Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS 0.01 Imaging Mode BRIGHT FIELD Specimen Holder Model FEI TITAN KRIOS AUTOGRID HOLDER Nominal Magnification Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version PARTICLE SELECTION Appion IMAGE ACQUISITION SerialEM CTF CORRECTION CTFFIND MODEL FITTING Coot INITIAL EULER ASSIGNMENT EMAN FINAL EULER ASSIGNMENT FREALIGN RECONSTRUCTION FREALIGN MODEL REFINEMENT REFMAC
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION