☰ Navigation Tabs
Lambda excision HJ intermediate
Sample Lambda excision HJ intermediate
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument FEI VITROBOT MARK II Cryogen Name ETHANE Sample Vitrification Details 10 second blot followed by plunging into liquid ethane (FEI VITROBOT MARK II).
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 10956 Reported Resolution (Å) 11 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT Point Symmetry C1
Map-Model Fitting and Refinement Id 1 Refinement Space RECIPROCAL Refinement Protocol OTHER Refinement Target MLHL Overall B Value Fitting Procedure Details Highly restrained DEN refinement in CNS
Data Acquisition Detector Type FEI FALCON II (4k x 4k) Electron Dose (electrons/Å**2) 35.5
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model FEI TECNAI F30 Minimum Defocus (nm) 2600 Maximum Defocus (nm) 4150 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS 2 Imaging Mode BRIGHT FIELD Specimen Holder Model GATAN 626 SINGLE TILT LIQUID NITROGEN CRYO TRANSFER HOLDER Nominal Magnification 78000 Calibrated Magnification 100000 Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version PARTICLE SELECTION e2boxer EMAN2 IMAGE ACQUISITION SerialEM CTF CORRECTION CTFFIND3 MODEL REFINEMENT CNS 1.3 INITIAL EULER ASSIGNMENT e2initialmodel EMAN2 FINAL EULER ASSIGNMENT FREALIGN 9.11 CLASSIFICATION FREALIGN 9.11 RECONSTRUCTION FREALIGN 9.11
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION Built-in correction in Frealign v9 66033