☰ Navigation Tabs
The crystal structure of Staphylococcus aureus CntA in apo form
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 289 0.1 M MES monohydrate pH 5.5, 25% (v/v) Polyethylene glycol 400
Crystal Properties Matthews coefficient Solvent content 3 59.04
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 149.395 α = 90 b = 149.395 β = 90 c = 53.635 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 77 PIXEL DECTRIS PILATUS3 6M 2017-01-20 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRF BEAMLINE BL18U1 0.9778 SSRF BL18U1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.9 50 100 16.7 20 15367
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.9 49.5 14596 770 99.92 0.19369 0.19004 0.1943 0.26367 0.2651 RANDOM 86.528
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.23 0.61 1.23 -3.98
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 43.889 r_dihedral_angle_3_deg 20.001 r_dihedral_angle_4_deg 17.867 r_long_range_B_refined 8.412 r_long_range_B_other 8.411 r_dihedral_angle_1_deg 8.135 r_scangle_other 5.857 r_mcangle_it 5.571 r_mcangle_other 5.57 r_mcbond_it 3.547
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 43.889 r_dihedral_angle_3_deg 20.001 r_dihedral_angle_4_deg 17.867 r_long_range_B_refined 8.412 r_long_range_B_other 8.411 r_dihedral_angle_1_deg 8.135 r_scangle_other 5.857 r_mcangle_it 5.571 r_mcangle_other 5.57 r_mcbond_it 3.547 r_mcbond_other 3.547 r_scbond_it 3.486 r_scbond_other 3.471 r_angle_refined_deg 2.046 r_angle_other_deg 1.151 r_chiral_restr 0.113 r_bond_refined_d 0.017 r_gen_planes_refined 0.008 r_bond_other_d 0.002 r_gen_planes_other 0.002 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4008 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms 19
Software Software Software Name Purpose REFMAC refinement HKL-3000 data reduction HKL-3000 data scaling PHASER phasing