5U4K | pdb_00005u4k

NMR structure of the complex between the KIX domain of CBP and the transactivation domain 1 of p65

SOLUTION NMR

NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	0.8 mM [U-99% 13C; U-99% 15N] p65 TA1, 2.4 mM KIX domain	90% H2O/10% D2O	0 M	6.5	1 atm	298	Varian UNITYINOVA 600
2	3D HNCO	0.8 mM [U-99% 13C; U-99% 15N] p65 TA1, 2.4 mM KIX domain	90% H2O/10% D2O	0 M	6.5	1 atm	298	Varian UNITYINOVA 600
3	3D HNCACB	0.8 mM [U-99% 13C; U-99% 15N] p65 TA1, 2.4 mM KIX domain	90% H2O/10% D2O	0 M	6.5	1 atm	298	Varian UNITYINOVA 600
4	3D HCCH-TOCSY	0.8 mM [U-99% 13C; U-99% 15N] p65 TA1, 2.4 mM KIX domain	90% H2O/10% D2O	0 M	6.5	1 atm	298	Varian UNITYINOVA 600
5	3D H(CCO)NH	0.8 mM [U-99% 13C; U-99% 15N] p65 TA1, 2.4 mM KIX domain	90% H2O/10% D2O	0 M	6.5	1 atm	298	Varian UNITYINOVA 600
6	2D 1H-13C HSQC	0.8 mM [U-99% 13C; U-99% 15N] p65 TA1, 2.4 mM CBP-KIX	100% D2O	0 M	6.5	1 atm	298	Varian UNITYINOVA 600
17	3D 1H-13C NOESY	0.8 mM [U-99% 13C; U-99% 15N] p65 TA1, 2.4 mM CBP-KIX	100% D2O	0 M	6.5	1 atm	298	Varian UNITYINOVA 600
16	2D 1H-15N HSQC	0.8 mM [U-99% 13C; U-99% 15N] CBP-KIX, 2.4 mM p65 TA1	90% H2O/10% D2O	0 M	6.5	1 atm	298	Varian UNITYINOVA 600
15	3D HNCO	0.8 mM [U-99% 13C; U-99% 15N] CBP-KIX, 2.4 mM p65 TA1	90% H2O/10% D2O	0 M	6.5	1 atm	298	Varian UNITYINOVA 600
14	3D HNCACB	0.8 mM [U-99% 13C; U-99% 15N] CBP-KIX, 2.4 mM p65 TA1	90% H2O/10% D2O	0 M	6.5	1 atm	298	Varian UNITYINOVA 600
13	3D HCCH-TOCSY	0.8 mM [U-99% 13C; U-99% 15N] CBP-KIX, 2.4 mM p65 TA1	90% H2O/10% D2O	0 M	6.5	1 atm	298	Varian UNITYINOVA 600
12	3D H(CCO)NH	0.8 mM [U-99% 13C; U-99% 15N] CBP-KIX, 2.4 mM p65 TA1	90% H2O/10% D2O	0 M	6.5	1 atm	298	Varian UNITYINOVA 600
11	3D 1H-15N NOESY	0.8 mM [U-99% 13C; U-99% 15N] CBP-KIX, 2.4 mM p65 TA1	90% H2O/10% D2O	0 M	6.5	1 atm	298	Varian UNITYINOVA 600
10	2D 1H-13C HSQC aliphatic	0.8 mM [U-99% 13C; U-99% 15N] CBP-KIX, 2.4 mM p65 TA1	100% D2O	0 M	6.5	1 atm	298	Varian UNITYINOVA 600
9	2D 1H-13C HSQC aromatic	0.8 mM [U-99% 13C; U-99% 15N] CBP-KIX, 2.4 mM p65 TA1	100% D2O	0 M	6.5	1 atm	298	Varian UNITYINOVA 600
8	3D 1H-13C NOESY	0.8 mM [U-99% 13C; U-99% 15N] CBP-KIX, 2.4 mM p65 TA1	100% D2O	0 M	6.5	1 atm	298	Varian UNITYINOVA 600
7	3D-intermolecular-NOESY	0.8 mM [U-99% 13C; U-99% 15N] CBP-KIX, 2.4 mM p65 TA1	100% D2O	0 M	6.5	1 atm	298	Varian UNITYINOVA 800

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Varian	UNITYINOVA	600
2	Varian	UNITYINOVA	800

NMR Refinement
Method	Details	Software
simulated annealing		CNS

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	260
Conformers Submitted Total Number	20
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	processing	NMRPipe		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
2	data analysis	Analysis		CCPN
3	structure calculation	ARIA		Linge, O'Donoghue and Nilges
4	refinement	CNS		Brunger, Adams, Clore, Gros, Nilges and Read

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.