☰ Navigation Tabs
Structure, inhibition and regulation of two-pore channel TPC1 from Arabidopsis thaliana
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 9.3 293 0.1 M glycine, pH 9.3, 50 mM potassium chloride, 1 mM calcium chloride, 35% PEG300
Crystal Properties Matthews coefficient Solvent content 4.41 72.1
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.18 α = 90 b = 154.81 β = 90 c = 219.77 γ = 90
Symmetry Space Group C 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315r 2015-02-24 M SINGLE WAVELENGTH 2 1 x-ray CCD ADSC QUANTUM 315r M SINGLE WAVELENGTH 3 1 x-ray PIXEL DECTRIS PILATUS 6M M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 8.3.1 1, 1.006, 1.25465, 1.3854, 1.75 ALS 8.3.1 2 SYNCHROTRON ALS BEAMLINE 5.0.2 ALS 5.0.2 3 SYNCHROTRON SSRL BEAMLINE BL12-2 SSRL BL12-2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.7 109.885 93.9 0.156 0.156 10.42 7.3 36476 21275 108
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.7 3 81.4 0.732 7.328 0.31 7.3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MIRAS THROUGHOUT 2.872 38.703 1.33 21270 1052 61.27 0.299 0.297 0.2984 0.3394 0.3441 110.3123
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 17.699 f_angle_d 0.744 f_chiral_restr 0.04 f_bond_d 0.004 f_plane_restr 0.004
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 5282 Nucleic Acid Atoms Solvent Atoms 57 Heterogen Atoms 63
Software Software Software Name Purpose PHENIX refinement SHARP phasing DM phasing XDS data reduction XSCALE data scaling