4NS5

Crystal structure of human BS69 Bromo-Zinc finger-PWWP


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP92850.1M Tris-HCl pH 9.0, 4% w/v Polyethylene glycol (PEG) 8000, VAPOR DIFFUSION, SITTING DROP, temperature 285K
2VAPOR DIFFUSION, SITTING DROP8.42850.1 M Bicine, pH8.4, 2% v/v 1, 4-Dioxane, 2% w/v PEG 20000, VAPOR DIFFUSION, SITTING DROP, temperature 285K

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 54.76α = 90
b = 64.38β = 90
c = 73.4γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDRAYONIX MX-2252010-09-22MSINGLE WAVELENGTH
22x-ray100CCDRAYONIX MX-2252010-11-14MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSSRF BEAMLINE BL17U0.9793SSRFBL17U
2SYNCHROTRONSSRF BEAMLINE BL17U0.9793SSRFBL17U

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
1,21.948.499.10.10212.27.3208322083211
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1,21.9298.40.5480.5481.37.42952

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT1.931.882083220667106798.170.20870.20650.2506RANDOM37.0629
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.02-0.01-0.01
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.338
r_dihedral_angle_4_deg27.935
r_dihedral_angle_3_deg17.183
r_dihedral_angle_1_deg5.536
r_mcangle_it3.104
r_mcbond_other1.954
r_mcbond_it1.953
r_angle_refined_deg1.128
r_angle_other_deg0.707
r_chiral_restr0.069
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.338
r_dihedral_angle_4_deg27.935
r_dihedral_angle_3_deg17.183
r_dihedral_angle_1_deg5.536
r_mcangle_it3.104
r_mcbond_other1.954
r_mcbond_it1.953
r_angle_refined_deg1.128
r_angle_other_deg0.707
r_chiral_restr0.069
r_bond_refined_d0.008
r_gen_planes_refined0.005
r_bond_other_d0.001
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1558
Nucleic Acid Atoms
Solvent Atoms94
Heterogen Atoms1

Software

Software
Software NamePurpose
MOSFLMdata reduction
SCALAdata scaling
SOLVEphasing
RESOLVEphasing
REFMACrefinement
PDB_EXTRACTdata extraction
MAR345dtbdata collection