4HVP

Structure of complex of synthetic HIV-1 protease with a substrate-based inhibitor at 2.3 Angstroms resolution


X-RAY DIFFRACTION

Crystallization

Crystal Properties
Matthews coefficientSolvent content
2.1442.57

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 51.7α = 90
b = 59.2β = 90
c = 62.45γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray

Refinement

Statistics
Diffraction IDStructure Solution MethodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTION2.31078130.176
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
p_staggered_tor21.6
p_orthonormal_tor9.4
p_scangle_it4.164
p_scbond_it3.111
p_planar_tor2.6
p_mcangle_it1.59
p_mcbond_it1.002
p_multtor_nbd0.297
p_singtor_nbd0.271
p_chiral_restr0.22
RMS Deviations
KeyRefinement Restraint Deviation
p_staggered_tor21.6
p_orthonormal_tor9.4
p_scangle_it4.164
p_scbond_it3.111
p_planar_tor2.6
p_mcangle_it1.59
p_mcbond_it1.002
p_multtor_nbd0.297
p_singtor_nbd0.271
p_chiral_restr0.22
p_xhyhbond_nbd0.204
p_planar_d0.068
p_angle_d0.067
p_bond_d0.019
p_plane_restr0.014
p_angle_deg
p_hb_or_metal_coord
p_xyhbond_nbd
p_transverse_tor
p_special_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1516
Nucleic Acid Atoms
Solvent Atoms70
Heterogen Atoms54

Software

Software
Software NamePurpose
PROLSQrefinement