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Crystal structure of a complex of the Miz1- and BCL6 POZ domains.
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 4.5 291 4 % PEG 3350, 3 % 2-propanol, 0.2 M ammonium citrate pH 4.5
Crystal Properties Matthews coefficient Solvent content 2.38 48.24
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 91.85 α = 90 b = 97.88 β = 90 c = 119.88 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL PSI PILATUS 6M 2014-04-25 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I04 0.97949 Diamond I04
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.23 58.47 99.3 0.046 0.025 0.997 19 4.1 52962
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.23 2.29 96.2 0.311 0.173 0.919 4.8 3.9 3738
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.23 58.47 52867 2580 99.07 0.2129 0.2114 0.2404 0.2339 RANDOM 46.076
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.75 1.61 -2.36
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.297 r_dihedral_angle_4_deg 22.754 r_dihedral_angle_3_deg 13.69 r_dihedral_angle_1_deg 5.564 r_mcangle_it 5.534 r_mcbond_it 3.985 r_mcbond_other 3.982 r_angle_refined_deg 1.502 r_angle_other_deg 1.457 r_chiral_restr 0.085
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.297 r_dihedral_angle_4_deg 22.754 r_dihedral_angle_3_deg 13.69 r_dihedral_angle_1_deg 5.564 r_mcangle_it 5.534 r_mcbond_it 3.985 r_mcbond_other 3.982 r_angle_refined_deg 1.502 r_angle_other_deg 1.457 r_chiral_restr 0.085 r_bond_refined_d 0.015 r_bond_other_d 0.008 r_gen_planes_refined 0.008 r_gen_planes_other 0.006
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 7161 Nucleic Acid Atoms Solvent Atoms 163 Heterogen Atoms
Software Software Software Name Purpose Aimless data scaling XDS data reduction PDB_EXTRACT data extraction PHASER phasing ARP model building REFMAC refinement XSCALE data reduction