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X-ray structure of the adduct formed between hen egg white lysozyme and trans-dimethylamine methylamine dichlorido platinum(II)
Crystallization Crystal Properties Matthews coefficient Solvent content 1.96 37.09
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 77.92 α = 90 b = 77.92 β = 90 c = 36.921 γ = 90
Symmetry Space Group P 43 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD RIGAKU SATURN 944+ mirrors M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU MICROMAX-007 HF 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.51 55.1 100 4246 4246
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.51 55.1 4019 193 99.76 0.18302 0.1791 0.1845 0.25886 0.2525 RANDOM 50.894
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.19 -1.19 2.38
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.023 r_dihedral_angle_4_deg 20.834 r_dihedral_angle_3_deg 18.091 r_long_range_B_refined 8.14 r_long_range_B_other 8.034 r_dihedral_angle_1_deg 6.693 r_scangle_other 5.124 r_mcangle_it 4.865 r_mcangle_other 4.861 r_scbond_it 3.417
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.023 r_dihedral_angle_4_deg 20.834 r_dihedral_angle_3_deg 18.091 r_long_range_B_refined 8.14 r_long_range_B_other 8.034 r_dihedral_angle_1_deg 6.693 r_scangle_other 5.124 r_mcangle_it 4.865 r_mcangle_other 4.861 r_scbond_it 3.417 r_scbond_other 3.24 r_mcbond_it 3.084 r_mcbond_other 3.084 r_angle_refined_deg 1.453 r_angle_other_deg 0.872 r_chiral_restr 0.078 r_bond_refined_d 0.011 r_gen_planes_refined 0.007 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1001 Nucleic Acid Atoms Solvent Atoms 56 Heterogen Atoms 6
Software Software Software Name Purpose CrystalClear data collection PHASER phasing REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling