X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP29622%PEG8000,50mM Potassium phosphate monobasic, VAPOR DIFFUSION, HANGING DROP, temperature 296K
Crystal Properties
Matthews coefficientSolvent content
2.3547.58

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 45.46α = 67.23
b = 68.97β = 91.69
c = 73.46γ = 75.27
Symmetry
Space GroupP 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 315r2013-07-13MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAUSTRALIAN SYNCHROTRON BEAMLINE MX20.9537Australian SynchrotronMX2

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
1236.2892.90.0835325949478

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTpdb entry 1U6M236.285059446952249592.870.194090.19170.23912RANDOM28.369
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.050.01-0.04-0.040.070.1
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.74
r_dihedral_angle_3_deg14.404
r_dihedral_angle_4_deg13.565
r_dihedral_angle_1_deg5.95
r_long_range_B_refined5.691
r_long_range_B_other5.452
r_scangle_other3.548
r_mcangle_it2.495
r_mcangle_other2.495
r_scbond_it2.242
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.74
r_dihedral_angle_3_deg14.404
r_dihedral_angle_4_deg13.565
r_dihedral_angle_1_deg5.95
r_long_range_B_refined5.691
r_long_range_B_other5.452
r_scangle_other3.548
r_mcangle_it2.495
r_mcangle_other2.495
r_scbond_it2.242
r_scbond_other2.241
r_mcbond_it1.584
r_mcbond_other1.582
r_angle_refined_deg1.246
r_angle_other_deg0.756
r_chiral_restr0.072
r_bond_refined_d0.009
r_gen_planes_refined0.005
r_bond_other_d0.001
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms6018
Nucleic Acid Atoms
Solvent Atoms527
Heterogen Atoms

Software

Software
Software NamePurpose
Blu-Icedata collection
CCP4model building
REFMACrefinement
MOSFLMdata reduction
SCALAdata scaling
CCP4phasing