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Crystal Structure of Haptocorrin in Complex with CNCbl
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2PMV pdb entries 2PMV, 2BB6 experimental model PDB 2BB6 pdb entries 2PMV, 2BB6
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6.5 277 50% PEG 400, 0.2M magnesium chloride, 0.1M sodium cacodylate, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K
Crystal Properties Matthews coefficient Solvent content 3.57 65.56
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 149.89 α = 90 b = 149.89 β = 90 c = 57.49 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL PSI PILATUS 6M 2011-03-25 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X06SA SLS X06SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.35 49 100 0.096 0.096 10.2 31018
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.35 2.4 100 1.485 1.485 1.89 10.6
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT pdb entries 2PMV, 2BB6 2.35 49 2 31018 31015 1565 100 0.197 0.196 0.2018 0.226 0.2303
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 14.037 f_angle_d 0.683 f_chiral_restr 0.046 f_bond_d 0.002 f_plane_restr 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3116 Nucleic Acid Atoms Solvent Atoms 134 Heterogen Atoms 269
Software Software Software Name Purpose RemDAq data collection PHASER phasing PHENIX refinement XDS data reduction XDS data scaling