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BRAF in complex with compound 3
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1UWH PDB ENTRY 1UWH
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 6.5 293 salt, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 4.26 71.13
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 204.74 α = 90 b = 204.74 β = 90 c = 152.95 γ = 90
Symmetry Space Group I 41 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MAR CCD 165 mm dynamically bendable mirror 2007-12-03 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X06SA 0.9999 SLS X06SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3.1 47.25 95.1 0.14 3.8 28238 28238
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 3.1 3.17 85.9 0.795 3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 1UWH 3.1 47.25 26825 26825 1412 100 0.22413 0.22413 0.22166 0.225 0.27158 0.2724 RANDOM 68.488
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.52 -1.52 3.04
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.695 r_dihedral_angle_3_deg 18.487 r_dihedral_angle_4_deg 17.688 r_dihedral_angle_1_deg 7.012 r_scangle_it 2.016 r_mcangle_it 1.326 r_scbond_it 1.297 r_angle_refined_deg 1.266 r_mcbond_it 1.16 r_angle_other_deg 0.789
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.695 r_dihedral_angle_3_deg 18.487 r_dihedral_angle_4_deg 17.688 r_dihedral_angle_1_deg 7.012 r_scangle_it 2.016 r_mcangle_it 1.326 r_scbond_it 1.297 r_angle_refined_deg 1.266 r_mcbond_it 1.16 r_angle_other_deg 0.789 r_nbd_refined 0.219 r_symmetry_vdw_refined 0.218 r_symmetry_vdw_other 0.205 r_nbd_other 0.187 r_nbtor_refined 0.184 r_xyhbond_nbd_refined 0.144 r_symmetry_hbond_refined 0.102 r_mcbond_other 0.101 r_nbtor_other 0.087 r_chiral_restr 0.067 r_bond_refined_d 0.01 r_gen_planes_refined 0.003 r_gen_planes_other 0.002 r_bond_other_d 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6367 Nucleic Acid Atoms Solvent Atoms 15 Heterogen Atoms 30
Software Software Software Name Purpose MOLREP phasing REFMAC refinement XDS data reduction XSCALE data scaling