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Structure of human I113T SOD1 mutant complexed with dopamine in the p21 space group
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 5 100 MM SODIUM ACETATE, 150 MM SODIUM CHLORIDE, 2.5 M AMMONIUM SULPHATE PH 5
Crystal Properties Matthews coefficient Solvent content 1.83 32.77
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 38.396 α = 90 b = 68.035 β = 104.82 c = 49.851 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC CCD MIRRORS 2010-05-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SOLEIL BEAMLINE PROXIMA 1 SOLEIL PROXIMA 1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1 20 96.8 0.05 16.4 3.7 128603 9
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1 1.04 80.4 0.59 1.6 2.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION OTHER THROUGHOUT NONE 1 48.19 122450 6491 96.72 0.1591 0.15794 0.1606 0.18083 0.1835 RANDOM 15.176
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.02 -0.11 0.1 -0.14
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.006 r_sphericity_free 26.047 r_dihedral_angle_4_deg 13.903 r_dihedral_angle_3_deg 11.69 r_sphericity_bonded 10.001 r_dihedral_angle_1_deg 7.153 r_rigid_bond_restr 4.916 r_angle_other_deg 2.333 r_angle_refined_deg 1.728 r_chiral_restr 0.105
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.006 r_sphericity_free 26.047 r_dihedral_angle_4_deg 13.903 r_dihedral_angle_3_deg 11.69 r_sphericity_bonded 10.001 r_dihedral_angle_1_deg 7.153 r_rigid_bond_restr 4.916 r_angle_other_deg 2.333 r_angle_refined_deg 1.728 r_chiral_restr 0.105 r_bond_refined_d 0.015 r_bond_other_d 0.01 r_gen_planes_refined 0.009 r_gen_planes_other 0.005 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_it r_mcbond_other r_mcangle_it r_mcangle_other r_scbond_it r_scbond_other r_scangle_it r_scangle_other r_long_range_B_refined r_long_range_B_other
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2218 Nucleic Acid Atoms Solvent Atoms 243 Heterogen Atoms 35
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling REFMAC phasing