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The structure of ''breathing'' dengue virus.
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1P58
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument FEI VITROBOT MARK IV Cryogen Name ETHANE Sample Vitrification Details LIQUIDE ETHANE
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 5861 Reported Resolution (Å) 13.7 Resolution Method Other Details SUBMISSION BASED ON EXPERIMENTAL DATA FROM EMDB EMD-2296. (DEPOSITION ID: 11386). Refinement Type Symmetry Type POINT Point Symmetry I
Map-Model Fitting and Refinement Id 1 (1P58) Refinement Space REAL Refinement Protocol OTHER Refinement Target Cross-correlation coefficient Overall B Value Fitting Procedure Details METHOD--CORRELATION REFINEMENT PROTOCOL--CRYO-EM
Data Acquisition Detector Type GENERIC GATAN Electron Dose (electrons/Å**2) 18.5
Imaging Experiment 1 Date of Experiment 2011-11-21 Temperature (Kelvin) 100 Microscope Model FEI TITAN KRIOS Minimum Defocus (nm) 1500 Maximum Defocus (nm) 3000 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS 2.7 Imaging Mode BRIGHT FIELD Specimen Holder Model Nominal Magnification 47000 Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 200 Imaging Details
EM Software Task Software Package Version MODEL FITTING UCSF Chimera RECONSTRUCTION EMAN 1 RECONSTRUCTION EMAN 2 RECONSTRUCTION MPSA
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details INDIVIDUAL PARTICLES