X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION82981.2 M ammonium sulphate, 2% (w/v) PEG 1000, 3% (w/v) trimethylamine N-oxide dihydrate, pH 8.0, VAPOR DIFFUSION, temperature 298K
Crystal Properties
Matthews coefficientSolvent content
2.6754

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 154.835α = 90
b = 154.835β = 90
c = 70.966γ = 90
Symmetry
Space GroupI 4

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARRESEARCH2010-10-30MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 21-ID-D1.0APS21-ID-D

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.630832640922
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.62.69100

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT2.629.7826402187899.970.20920.20920.2070.2381RANDOM56.278
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
2.42.4-4.81
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.798
r_dihedral_angle_4_deg21.005
r_dihedral_angle_3_deg16.056
r_dihedral_angle_1_deg5.564
r_scangle_it2.637
r_scbond_it1.503
r_mcangle_it1.48
r_angle_refined_deg1.264
r_angle_other_deg0.86
r_mcbond_it0.787
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.798
r_dihedral_angle_4_deg21.005
r_dihedral_angle_3_deg16.056
r_dihedral_angle_1_deg5.564
r_scangle_it2.637
r_scbond_it1.503
r_mcangle_it1.48
r_angle_refined_deg1.264
r_angle_other_deg0.86
r_mcbond_it0.787
r_mcbond_other0.084
r_chiral_restr0.07
r_bond_refined_d0.012
r_gen_planes_refined0.004
r_bond_other_d0.002
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms4778
Nucleic Acid Atoms
Solvent Atoms146
Heterogen Atoms17

Software

Software
Software NamePurpose
DENZOdata reduction
PHASERphasing
REFMACrefinement
PDB_EXTRACTdata extraction
HKL-2000data collection
SCALEPACKdata scaling