Experiment: 3UI5

X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION	8	298	0.1 M Tris, 2.5 M (NH4)2SO4, 3-20 mM Ala-Pro, pH 8.0, vapor diffusion, temperature 298K

Crystal Properties
Matthews coefficient	Solvent content
1.88	34.53

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 34.17	α = 90
b = 47.06	β = 90
c = 51.83	γ = 90

Symmetry
Space Group	P 21 21 21

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	IMAGE PLATE	MAR scanner 345 mm plate		2008-08-13	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	ROTATING ANODE	RIGAKU MICROMAX-007 HF	1.5418

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	R Merge I (Observed)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	1.4	34.84	98.3	0.052	82.35			16763		-3	13.047

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	R Merge I (Observed)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	1.4	1.5	93.8		0.1	49.66

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (Observed)	R-Work	R-Free	R-Free Selection Details	Mean Isotropic B
X-RAY DIFFRACTION		THROUGHOUT	1.4	34.84	16763	821	98.48	0.0983	0.0962	0.1365	RANDOM	10.2658

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
0.08			0.07		-0.15

RMS Deviations
Key	Refinement Restraint Deviation
r_sphericity_free	36.326
r_dihedral_angle_2_deg	36.049
r_dihedral_angle_4_deg	12.091
r_dihedral_angle_3_deg	11.912
r_sphericity_bonded	9.377
r_dihedral_angle_1_deg	6.586
r_rigid_bond_restr	4.506
r_angle_refined_deg	2.402
r_angle_other_deg	1.166
r_chiral_restr	0.403

RMS Deviations
Key	Refinement Restraint Deviation
r_sphericity_free	36.326
r_dihedral_angle_2_deg	36.049
r_dihedral_angle_4_deg	12.091
r_dihedral_angle_3_deg	11.912
r_sphericity_bonded	9.377
r_dihedral_angle_1_deg	6.586
r_rigid_bond_restr	4.506
r_angle_refined_deg	2.402
r_angle_other_deg	1.166
r_chiral_restr	0.403
r_bond_refined_d	0.023
r_gen_planes_refined	0.01
r_bond_other_d	0.008
r_gen_planes_other	0.002

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	778
Nucleic Acid Atoms
Solvent Atoms	166
Heterogen Atoms	30

Software

Software
Software Name	Purpose
XSCALE	data scaling
REFMAC	refinement
PDB_EXTRACT	data extraction

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.