X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
14.57% PEG 3350, 66MM CITRIC ACID, 2 MM TRIS, 5% V/V ETHYL ACETATE, PH 4.50, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 323K
Crystal Properties
Matthews coefficientSolvent content
2.0640

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 42.26α = 90
b = 78.25β = 90.23
c = 123.62γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 42004-01-31MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONALS BEAMLINE 8.3.1ALS8.3.1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.91595.60.08110.83.270733
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.91.95790.2365.21.6

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTA STRUCTURE DETERMINED FROM A SINGLE PT DERIVATIVE IN ANOTHER SPACE GROUP WAS USED AS THE PROBE MODEL FOR MOLECULAR REPLACEMENT.1.9115271528261000.1870.1830.26RANDOM17.23
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.890.260.21-1.09
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg39.293
r_dihedral_angle_4_deg20.603
r_dihedral_angle_3_deg15.753
r_dihedral_angle_1_deg7.909
r_scangle_it4.098
r_angle_other_deg3.556
r_scbond_it2.843
r_mcangle_it1.922
r_angle_refined_deg1.704
r_mcbond_it1.182
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg39.293
r_dihedral_angle_4_deg20.603
r_dihedral_angle_3_deg15.753
r_dihedral_angle_1_deg7.909
r_scangle_it4.098
r_angle_other_deg3.556
r_scbond_it2.843
r_mcangle_it1.922
r_angle_refined_deg1.704
r_mcbond_it1.182
r_nbd_other0.495
r_nbtor_refined0.303
r_nbtor_other0.233
r_nbd_refined0.228
r_symmetry_hbond_refined0.215
r_symmetry_vdw_refined0.204
r_xyhbond_nbd_refined0.2
r_chiral_restr0.134
r_bond_other_d0.132
r_mcbond_other0.075
r_gen_planes_other0.034
r_bond_refined_d0.017
r_gen_planes_refined0.007
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms6420
Nucleic Acid Atoms
Solvent Atoms890
Heterogen Atoms

Software

Software
Software NamePurpose
PHASERphasing
REFMACrefinement
MOSFLMdata reduction
XDSdata scaling