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Crystal structure of the M. tuberculosis beta clamp
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7 295 9% Isopropanol, 12% PEG 4000, 0.1M Na HEPES , pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 295K
Crystal Properties Matthews coefficient Solvent content 3.15 60.91
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 71.903 α = 90 b = 233.247 β = 90 c = 124.301 γ = 90
Symmetry Space Group C 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU MICROMAX-007 HF 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3 41.1 3.6 21391
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 3 21.81 21312 1093 99.54 0.211 0.2089 0.2269 0.2503 0.2622 RANDOM 108.444
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 12.35 -6.32 -6.04
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.858 r_dihedral_angle_3_deg 20.632 r_dihedral_angle_4_deg 15.879 r_scangle_it 14.332 r_dihedral_angle_1_deg 11.288 r_mcangle_it 11.226 r_scbond_it 9.822 r_mcbond_it 7.408 r_angle_refined_deg 1.424 r_nbtor_refined 0.334
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.858 r_dihedral_angle_3_deg 20.632 r_dihedral_angle_4_deg 15.879 r_scangle_it 14.332 r_dihedral_angle_1_deg 11.288 r_mcangle_it 11.226 r_scbond_it 9.822 r_mcbond_it 7.408 r_angle_refined_deg 1.424 r_nbtor_refined 0.334 r_nbd_refined 0.307 r_symmetry_vdw_refined 0.269 r_xyhbond_nbd_refined 0.152 r_chiral_restr 0.092 r_bond_refined_d 0.01 r_gen_planes_refined 0.008
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 5813 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement PDB_EXTRACT data extraction