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Crystal structure of FlgN chaperone from Bordetella pertussis
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 7.5 277 0.02 M MgCl2, 0.1 M HEPES, 22% polyacrylic acid 5100 sodium salt, strontium chloride 0.01 M, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K
Crystal Properties Matthews coefficient Solvent content 2.29 46.21
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 66.57 α = 90 b = 90.39 β = 90 c = 49.19 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 210r mirrors 2010-07-19 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-BM 0.97924, 0.9793992, 0.9796705 APS 19-BM
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.09 50 99.8 0.1 19.7 4.5 18169 -3 29
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.1 2.14 100 0.583 2.4 4.5 900
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 2.09 27.45 18056 18056 1297 99.36 0.21601 0.21601 0.21306 0.2168 0.25574 0.2633 RANDOM 25.4
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.03 -1.9 2.93
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.73 r_dihedral_angle_4_deg 20.431 r_dihedral_angle_3_deg 14.442 r_dihedral_angle_1_deg 4.303 r_scangle_it 4.256 r_scbond_it 2.5 r_mcangle_it 1.346 r_angle_refined_deg 1.199 r_angle_other_deg 0.865 r_mcbond_it 0.689
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.73 r_dihedral_angle_4_deg 20.431 r_dihedral_angle_3_deg 14.442 r_dihedral_angle_1_deg 4.303 r_scangle_it 4.256 r_scbond_it 2.5 r_mcangle_it 1.346 r_angle_refined_deg 1.199 r_angle_other_deg 0.865 r_mcbond_it 0.689 r_mcbond_other 0.17 r_chiral_restr 0.065 r_bond_refined_d 0.013 r_gen_planes_refined 0.005 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1924 Nucleic Acid Atoms Solvent Atoms 84 Heterogen Atoms 6
Software Software Software Name Purpose SBC-Collect data collection Auto-Rickshaw phasing SHELXD phasing ABS model building SHARP phasing DM model building HELICAP model building Coot model building REFMAC refinement HKL-3000 data reduction HKL-3000 data scaling ABS phasing DM phasing HELICAP phasing