☰ Navigation Tabs
Akt1 kinase domain with pyrrolopyrimidine inhibitor
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 Under oil 7.5 293 20% PEG 4000, 100mM Hepes, 10% Isopropanol, 10 mg/ml Akt1 kinase domain, 0.6 mM GSK 3 beta peptide, pH 7.5, Under oil, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.64 53.47
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 86.265 α = 90 b = 56.013 β = 104.27 c = 91.65 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE RIGAKU RAXIS IV++ mirrors 2004-05-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU FR-E DW 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.7 30 98.3 0.187 0.154 7.9 3.1 23629 23237 29.1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.7 2.85 95.2 0.448 0.368 2.1 2.8 3240
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.7 29.72 23629 22103 1124 0.21686 0.21356 0.2116 0.28169 0.2782 RANDOM 54.308
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.67 0.85 -0.46 0.2
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.674 r_dihedral_angle_4_deg 19.855 r_dihedral_angle_3_deg 17.753 r_dihedral_angle_1_deg 5.845 r_scangle_it 1.957 r_angle_refined_deg 1.24 r_scbond_it 1.107 r_mcangle_it 0.907 r_mcbond_it 0.473 r_chiral_restr 0.082
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.674 r_dihedral_angle_4_deg 19.855 r_dihedral_angle_3_deg 17.753 r_dihedral_angle_1_deg 5.845 r_scangle_it 1.957 r_angle_refined_deg 1.24 r_scbond_it 1.107 r_mcangle_it 0.907 r_mcbond_it 0.473 r_chiral_restr 0.082 r_bond_refined_d 0.009 r_gen_planes_refined 0.004 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 5364 Nucleic Acid Atoms Solvent Atoms 99 Heterogen Atoms 56
Software Software Software Name Purpose CrystalClear data collection MOLREP phasing REFMAC refinement MOSFLM data reduction SCALA data scaling