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Structure of GrC mutant E192R/E193G
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1A1U PDB ENTRY 1A1U
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.6 298 0.2M ammonium sulfate, 0.25g/ml PEG 3350, 0.1M sodium cacodylate, pH 6.6, vapor diffusion, hanging drop, temperature 298K
Crystal Properties Matthews coefficient Solvent content 3.03 59.39
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 71.375 α = 90 b = 71.375 β = 90 c = 207.171 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 210 2006-05-02 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 17-ID 1.0 APS 17-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.496 61.812 97.6 0.067 0.067 9.362 4.6 20089
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.5 2.64 98.6 0.716 0.716 1.1 4.5 2974
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 1A1U 2.5 59.23 20087 992 97.53 0.213 0.212 0.2204 0.236 0.2456 RANDOM 33.373
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 3.68 1.84 3.68 -5.52
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 29.606 r_dihedral_angle_3_deg 15.19 r_dihedral_angle_4_deg 11.365 r_dihedral_angle_1_deg 8.006 r_scangle_it 5.635 r_scbond_it 3.952 r_mcangle_it 2.805 r_mcbond_it 1.5 r_angle_refined_deg 1.345 r_chiral_restr 0.09
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 29.606 r_dihedral_angle_3_deg 15.19 r_dihedral_angle_4_deg 11.365 r_dihedral_angle_1_deg 8.006 r_scangle_it 5.635 r_scbond_it 3.952 r_mcangle_it 2.805 r_mcbond_it 1.5 r_angle_refined_deg 1.345 r_chiral_restr 0.09 r_bond_refined_d 0.01 r_gen_planes_refined 0.005
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3054 Nucleic Acid Atoms Solvent Atoms 28 Heterogen Atoms
Software Software Software Name Purpose MOSFLM data reduction SCALA data scaling REFMAC refinement PDB_EXTRACT data extraction