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HIV-1 RT with non-nucleoside inhibitor annulated Pyrazole 1
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 7.2 293 1.15 M SODIUM MALONATE, 50 mM POTASSIUM PHOSPHATE PH 7.2, 5% ETHYLENE GLYCOL, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 3.03 59.44
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 117.662 α = 90 b = 153.669 β = 90 c = 155.795 γ = 90
Symmetry Space Group C 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2007-09-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 5.0.2 0.97839 ALS 5.0.2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.3 50 96.6 0.071 4.6 62828 60666 64.7
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.3 2.38 47.8 0.669 1.15 2.3 3061
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.3 46.98 57573 3093 96.57 0.22076 0.21832 0.2219 0.2657 0.2702 RANDOM 47.177
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.53 -0.19 0.72
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.005 r_dihedral_angle_3_deg 18.313 r_dihedral_angle_4_deg 16.859 r_dihedral_angle_1_deg 6.686 r_scangle_it 2.279 r_scbond_it 1.518 r_angle_refined_deg 1.32 r_mcangle_it 1.169 r_mcbond_it 1.03 r_angle_other_deg 0.878
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.005 r_dihedral_angle_3_deg 18.313 r_dihedral_angle_4_deg 16.859 r_dihedral_angle_1_deg 6.686 r_scangle_it 2.279 r_scbond_it 1.518 r_angle_refined_deg 1.32 r_mcangle_it 1.169 r_mcbond_it 1.03 r_angle_other_deg 0.878 r_nbd_refined 0.2 r_symmetry_vdw_other 0.191 r_symmetry_vdw_refined 0.19 r_nbd_other 0.188 r_symmetry_hbond_refined 0.183 r_nbtor_refined 0.181 r_xyhbond_nbd_refined 0.173 r_mcbond_other 0.117 r_nbtor_other 0.088 r_chiral_restr 0.078 r_bond_refined_d 0.012 r_gen_planes_refined 0.004 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 7822 Nucleic Acid Atoms Solvent Atoms 311 Heterogen Atoms 28
Software Software Software Name Purpose REFMAC refinement Blu-Ice data collection HKL-2000 data reduction HKL-2000 data scaling