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Solution NMR structure of Q8ZP25_SALTY from Salmonella typhimurium. Northeast Structural Genomics Consortium target StR70
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 GFT (4,3)D HNNCABCA 1.2 mM [U-100% 13C; U-100% 15N] protein 95% H2O/5% D2O 50 6.0 ambient 298 2 GFT(4,3)D CABA(CO)NHN 1.2 mM [U-100% 13C; U-100% 15N] protein 95% H2O/5% D2O 50 6.0 ambient 298 3 GFT(4,3)D HABCAB(CO)NHN 1.2 mM [U-100% 13C; U-100% 15N] protein 95% H2O/5% D2O 50 6.0 ambient 298 4 GFT(4,3)D HCCH COSY 1.2 mM [U-100% 13C; U-100% 15N] protein 95% H2O/5% D2O 50 6.0 ambient 298 5 Sim 13C,15N-Resolved NOESY 1.2 mM [U-100% 13C; U-100% 15N] protein 95% H2O/5% D2O 50 6.0 ambient 298 6 2D 1H-15N HSQC 1.2 mM [U-100% 13C; U-100% 15N] protein 95% H2O/5% D2O 50 6.0 ambient 298 7 2D 1H-13C HSQC 1.2 mM [U-100% 13C; U-100% 15N] protein 95% H2O/5% D2O 50 6.0 ambient 298 8 2D 1H-13C HSQC 1.0 mM 5% 13C; 100% 15N protein 95% H2O/5% D2O 50 6.0 ambient 298 9 2D 1H-15N HSQC 1 mM [U-5% 13C; U-100% 15N] protein, 15.5 mg/mL phage 95% H2O/5% D2O 50 6.0 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian INOVA 600 2 Varian INOVA 750
NMR Refinement Method Details Software simulated annealing Constrained simulated annealing torsion angle molecular dynamics refinement using xplor, and rdcs refinement using cns and water bath CNS
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 refinement CNS Brunger A. T. et.al. 2 data analysis DYANA 1.5 Guntert, Braun and Wuthrich 3 structure solution CYANA 2.1 Guntert, Mumenthaler and Wuthrich 4 collection VNMR 6.1C Varian 5 peak picking XEASY 1.3 Bartels et al. 6 processing NMRPipe 2.3 Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 7 chemical shift assignment AutoAssign Zimmerman, Moseley, Kulikowski and Montelione 8 structure solution AutoStructure Huang, Tejero, Powers and Montelione 9 refinement X-PLOR NIH Schwieters, Kuszewski, Tjandra and Clore