Consensus structure of Pf1 filamentous bacteriophage from X-ray fibre diffraction and solid-state NMR
FIBER DIFFRACTION - SOLID-STATE NMR
Starting Model(s)
Initial Refinement Model(s) |
---|
Type | Source | Accession Code | Details |
---|
|
experimental model | PDB | 4IFM | PDB ENTRY 4IFM |
Crystal Data
Unit Cell |
---|
Length ( Å ) | Angle ( ˚ ) |
---|
a = 1 | α = 90 |
b = 1 | β = 90 |
c = 1 | γ = 90 |
Diffraction
Diffraction Experiment |
---|
ID # | Crystal ID | Scattering Type | Data Collection Temperature | Detector | Detector Type | Details | Collection Date | Monochromator | Protocol |
---|
1 | 1 | x-ray | 277 | | | | | M | SINGLE WAVELENGTH |
Radiation Source |
---|
ID # | Source | Type | Wavelength List | Synchrotron Site | Beamline |
---|
1 | ROTATING ANODE | | | | |
Data Collection
Overall |
---|
ID # | Resolution (High) | Resolution (Low) | Percent Possible (Observed) | R Merge I (Observed) | R Sym I (Observed) | Rrim I (All) | Rpim I (All) | CC (Half) | R Split (All) | Net I Over Average Sigma (I) | Redundancy | Number Reflections (All) | Number Reflections (Observed) | Observed Criterion Sigma (F) | Observed Criterion Sigma (I) | B (Isotropic) From Wilson Plot |
---|
1 | 2.6 | 12 | | | | | | | | | | | 3548 | | 0.8 | |
Refinement
Statistics |
---|
Diffraction ID | Structure Solution Method | Resolution (High) | Resolution (Low) | Cut-off Sigma (I) | Cut-off Sigma (F) | Number Reflections (All) | Number Reflections (Observed) | Number Reflections (R-Free) | Percent Reflections (Observed) | R-Factor (All) | R-Factor (Observed) | R-Work | R-Free | R-Free Selection Details | Mean Isotropic B |
---|
FIBER DIFFRACTION | MOLECULAR REPLACEMENT | 3.3 | | | | | | | | | | | | | |
Temperature Factor Modeling |
---|
Anisotropic B[1][1] | Anisotropic B[1][2] | Anisotropic B[1][3] | Anisotropic B[2][2] | Anisotropic B[2][3] | Anisotropic B[3][3] |
---|
| | | | | |
Non-Hydrogen Atoms Used in Refinement |
---|
Non-Hydrogen Atoms | Number |
---|
Protein Atoms | 322 |
Nucleic Acid Atoms | |
Solvent Atoms | |
Heterogen Atoms | |
Software
Software |
---|
Software Name | Purpose |
---|
XPLOR-NIH | phasing |
NMR Ensemble Information |
---|
Conformer Selection Criteria | |
---|
Conformers Calculated Total Number | |
---|
Conformers Submitted Total Number | 1 |
---|