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Structure of The HET-s(218-289) prion in its amyloid form obtained by solid-state NMR
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 CHHC 100% [U-100% 13C; U-100% 15N] HET-s(218-289); 100% H2O 100% H2O 0 7.5 ambient 278 2 NHHC 100% [U-100% 13C; U-100% 15N] HET-s(218-289); 100% H2O 100% H2O 0 7.5 ambient 278 3 CHHC 40% [U-100% 13C; U-100% 15N] HET-s(218-289); 60% HET-s(218-289); 100% H2O 100% H2O 0 7.5 ambient 278 4 NHHC 50% [U-100% 13C] HET-s(218-289); 50% [U-100% 15N] HET-s(218-289); 100% H2O 100% H2O 0 7.5 ambient 278 5 PDSD 100% [2-13C-100%; 15N-100%] HET-s(218-289); 100% H2O 100% H2O 0 7.5 ambient 278 6 PDSD 40% [2-13C-100%, 15N-100%] HET-s(218-289); 60% HET-s(218-289); 100% H2O 100% H2O 0 7.5 ambient 278 7 PDSD 40% [1,3-13C-100%; 15N-100%] HET-s(218-289); 60% HET-s(218-289); 100% H2O 100% H2O 0 7.5 ambient 278
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 600 2 Bruker AVANCE 850
NMR Refinement Method Details Software torsion angle dynamics TopSpin
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 200 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Additional NMR Experimental Information Details the study has been performed by solid-state NMR.
Computation: NMR Software # Classification Version Software Name Author 1 processing TopSpin Bruker Biospin 2 data analysis MOLMOL Koradi, Billeter and Wuthrich 3 data analysis ProcheckNMR Laskowski and MacArthur 4 data analysis PyMOL DeLano Scientific LLC 5 data analysis Sparky Goddard 6 data analysis CARA Keller and Wuthrich 7 processing XwinNMR Bruker Biospin 8 refinement CYANA 2.1 Guntert, Mumenthaler and Wuthrich