2Q6C

Design and synthesis of novel, conformationally restricted HMG-COA reductase inhibitors


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSIONVAPOR DIFFUSION
Crystal Properties
Matthews coefficientSolvent content
2.4349.46

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 82.816α = 90
b = 135.367β = 97.02
c = 83.121γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 2102003-04-19MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 17-IDAPS17-ID

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
125095.40.05412.93.7116834
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
22.0785.30.3193.510428

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONFOURIER SYNTHESISTHROUGHOUT25011092558750.219170.217450.25158RANDOM26.705
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.221.290.77-0.67
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg4.815
r_scangle_it1.134
r_angle_refined_deg1.075
r_angle_other_deg0.709
r_scbond_it0.631
r_mcangle_it0.505
r_mcbond_it0.266
r_nbd_other0.197
r_nbd_refined0.16
r_symmetry_vdw_other0.122
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg4.815
r_scangle_it1.134
r_angle_refined_deg1.075
r_angle_other_deg0.709
r_scbond_it0.631
r_mcangle_it0.505
r_mcbond_it0.266
r_nbd_other0.197
r_nbd_refined0.16
r_symmetry_vdw_other0.122
r_xyhbond_nbd_refined0.101
r_nbtor_other0.078
r_symmetry_vdw_refined0.065
r_symmetry_hbond_refined0.053
r_chiral_restr0.052
r_bond_refined_d0.005
r_bond_other_d0.002
r_gen_planes_refined0.002
r_gen_planes_other0.001
r_dihedral_angle_2_deg
r_dihedral_angle_3_deg
r_dihedral_angle_4_deg
r_nbtor_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms12416
Nucleic Acid Atoms
Solvent Atoms1120
Heterogen Atoms184

Software

Software
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
REFMACrefinement
PDB_EXTRACTdata extraction