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Crystal structure of InlA S192N Y369S/hEC1 complex
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1O6S
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6 298 PEG 4000, CaCl2, Na-Acetate, Tris/MES, pH 6.0, vapor diffusion, hanging drop, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.19 43.91
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 55.373 α = 90 b = 87.377 β = 90 c = 110.955 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MAR CCD 165 mm M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON BESSY BEAMLINE 14.1 0.95 BESSY 14.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.9 50 97.3 0.085 7.9 4.9 42046
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.9 1.97 85.8 0.422 4.2 3636
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1O6S 1.9 50 41988 2136 97.21 0.157 0.153 0.1573 0.219 RANDOM 20.47
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.03 1.63 -0.6
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 42.371 r_dihedral_angle_3_deg 12.395 r_dihedral_angle_4_deg 12.178 r_dihedral_angle_1_deg 5.002 r_scangle_it 3.606 r_mcangle_it 2.753 r_scbond_it 2.653 r_mcbond_it 2.193 r_angle_refined_deg 1.696 r_nbtor_refined 0.285
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 42.371 r_dihedral_angle_3_deg 12.395 r_dihedral_angle_4_deg 12.178 r_dihedral_angle_1_deg 5.002 r_scangle_it 3.606 r_mcangle_it 2.753 r_scbond_it 2.653 r_mcbond_it 2.193 r_angle_refined_deg 1.696 r_nbtor_refined 0.285 r_nbd_refined 0.18 r_symmetry_vdw_refined 0.169 r_symmetry_hbond_refined 0.139 r_xyhbond_nbd_refined 0.12 r_chiral_restr 0.079 r_bond_refined_d 0.021 r_gen_planes_refined 0.003
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4293 Nucleic Acid Atoms Solvent Atoms 837 Heterogen Atoms 4
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling EPMR phasing REFMAC refinement PDB_EXTRACT data extraction