2NXU
Atomic structure of translation initiation factor aIF2 beta-subunit from Archaebacteria sulfolobus solfataricus: high resolution NMR in solution
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D TOCSY | concentration 10 mg/ml, 20 mM NaCl | 10% D2O in H2O | 0.2 M | 8 | 1 atm | 298 | |
2 | 2D NOESY | concentration 10 mg/ml, 20 mM NaCl | 10% D2O in H2O | 0.2 M | 8 | 1 atm | 298 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AMX | 500 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
the structures were obtained by torsion angle dynamic calculation and energy minimization. | The structure were obtained using 635 non redundant NOE-derived distance restraints and were minimised with 1000 steps of conjugated gradient and 1000 of steepest discent. For the first six residues no signals were observed. | XwinNMR |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 20 |
Conformers Submitted Total Number | 10 |
Representative Model | 1 (lowest energy) |
Additional NMR Experimental Information | |
---|---|
Details | The TOCSY spectra were performed with a mixing time of 80 ms. NOESY spectra were acquired with mixing time of 200 and 300 ms. For all spectra watergate was used as scheme for solvent suppression. For the first six residues no signals were observed. |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | collection | XwinNMR | 2.6 | Bruker |
2 | data analysis | XEASY | 1.3.13 | P. Guntert and K. Wuthrich et al |
3 | structure solution | DYANA | 1.5 | P. Guntert and K. Wuthrich et al |
4 | refinement | GROMACS | 3.3.1 | David van der Spoel et al. |