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Solution structure of lysine-free (K0) ubiquitin
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 5 % [U-2H] D2O, 50 mM TRIS 95% H2O/5% D2O 0.01 7.2 ambient 298 2 3D HNCACB 5 % [U-2H] D2O, 50 mM TRIS 95% H2O/5% D2O 0.01 7.2 ambient 298 3 3D CBCA(CO)NH 5 % [U-2H] D2O, 50 mM TRIS 95% H2O/5% D2O 0.01 7.2 ambient 298 4 3D HBHA(CO)NH 5 % [U-2H] D2O, 50 mM TRIS 95% H2O/5% D2O 0.01 7.2 ambient 298 5 3D HNCA 5 % [U-2H] D2O, 50 mM TRIS 95% H2O/5% D2O 0.01 7.2 ambient 298 6 3D HN(CO)CA 5 % [U-2H] D2O, 50 mM TRIS 95% H2O/5% D2O 0.01 7.2 ambient 298 7 3D HNCO 5 % [U-2H] D2O, 50 mM TRIS 95% H2O/5% D2O 0.01 7.2 ambient 298 8 3D HCACO 5 % [U-2H] D2O, 50 mM TRIS 95% H2O/5% D2O 0.01 7.2 ambient 298 9 2D 1H-13C HSQC 5 % [U-2H] D2O, 50 mM TRIS 95% H2O/5% D2O 0.01 7.2 ambient 298 10 3D C(CO)NH 5 % [U-2H] D2O, 50 mM TRIS 95% H2O/5% D2O 0.01 7.2 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 700
NMR Refinement Method Details Software torsion angle dynamics Sparky
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 10000 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 chemical shift assignment Sparky Goddard 2 structure solution CS-ROSETTA Shen, Vernon, Baker and Bax 3 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 4 refinement CS-ROSETTA Shen, Vernon, Baker and Bax