Description of the Structural fluctuations of proteins from structure-based calculations of Residual dipolar couplings
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D 1H-15N HSQC | 200 mM protein | 90% H2O/10% D2O | 200 | 7 | ambient | 300 | |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | |||
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| molecular dynamics | GROMOS | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with acceptable covalent geometry |
| Conformers Calculated Total Number | 321 |
| Conformers Submitted Total Number | 301 |
| Representative Model | 1 (closest to the average) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | geometry optimization | GROMOS | van Gunsteren and Berendsen | |
| 2 | refinement | GROMOS | van Gunsteren and Berendsen | |
