2KV8

Solution structure ofRGS12 PDZ domain


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D HNCACB1 mM [U-13C; U-15N] pdz domain-190% H2O/10% D2O1505.4ambient293
23D CBCA(CO)NH1 mM [U-13C; U-15N] pdz domain-190% H2O/10% D2O1505.4ambient293
33D HBHA(CO)NH1 mM [U-13C; U-15N] pdz domain-190% H2O/10% D2O1505.4ambient293
43D HNCO1 mM [U-13C; U-15N] pdz domain-190% H2O/10% D2O1505.4ambient293
53D 1H-15N NOESY1 mM [U-13C; U-15N] pdz domain-190% H2O/10% D2O1505.4ambient293
63D 1H-13C NOESY1 mM [U-13C; U-15N] pdz domain-2100% D2O5.4293
72D 1H-13C HSQC1 mM [U-13C; U-15N] pdz domain-2100% D2O5.4293
83D HCCH-TOCSY1 mM [U-13C; U-15N] pdz domain-2100% D2O5.4293
93D HCCH-COSY1 mM [U-13C; U-15N] pdz domain-2100% D2O5.4293
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDMX500
2BrukerDMX600
NMR Refinement
MethodDetailsSoftware
distance geometry, simulated annealing, molecular dynamics, torsion angle dynamicsA total of 1230 experimental distance restraint derived from NOE and hydrogen bonds and 66 dihedral angle restraints were utilized in the structure calculationsCNS
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number200
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutionCNS1.1Brunger, Adams, Clore, Gros, Nilges and Read
2processingNMRPipe2.2Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
3data analysisMOLMOL2k.2Koradi, Billeter and Wuthrich
4data analysisSparky3Goddard
5processingCSI1.0David S. Wishart
6refinementCNS1.1Brunger, Adams, Clore, Gros, Nilges and Read