2KUN

Three dimensional structure of HuPrP(90-231 M129 Q212P)


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC1.0 mM [U-98% 13C; U-98% 15N] PrP(Q212P)-190% H2O/10% D2O150 NaCl5.5ambient298
23D HNCO1.0 mM [U-98% 13C; U-98% 15N] PrP(Q212P)-190% H2O/10% D2O150 NaCl5.5ambient298
33D HNCA1.0 mM [U-98% 13C; U-98% 15N] PrP(Q212P)-190% H2O/10% D2O150 NaCl5.5ambient298
43D CBCA(CO)NH1.0 mM [U-98% 13C; U-98% 15N] PrP(Q212P)-190% H2O/10% D2O150 NaCl5.5ambient298
53D HNCACB1.0 mM [U-98% 13C; U-98% 15N] PrP(Q212P)-190% H2O/10% D2O150 NaCl5.5ambient298
63D HN(CO)CA1.0 mM [U-98% 13C; U-98% 15N] PrP(Q212P)-190% H2O/10% D2O150 NaCl5.5ambient298
73D 1H-15N NOESY1.0 mM [U-98% 13C; U-98% 15N] PrP(Q212P)-190% H2O/10% D2O150 NaCl5.5ambient298
83D HBHA(CO)NH1.0 mM [U-98% 13C; U-98% 15N] PrP(Q212P)-190% H2O/10% D2O150 NaCl5.5ambient298
93D 1H-13C NOESY1.0 mM [U-98% 13C; U-98% 15N] PrP(Q212P)-2100% D2O150 NaClambient298
103D CCH-TOCSY1.0 mM [U-98% 13C; U-98% 15N] PrP(Q212P)-2100% D2O150 NaClambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianUniform NMR System800
2VarianUniform NMR System700
NMR Refinement
MethodDetailsSoftware
torsion angle dynamics, simulated annealingNMRPipe
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number200
Conformers Submitted Total Number20
Representative Model1 (closest to the average)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
2chemical shift assignmentSparkyGoddard
3data analysisSparkyGoddard
4peak pickingSparkyGoddard
5structure solutionCYANAGuntert, Mumenthaler and Wuthrich
6structure solutionCNSBrunger, Adams, Clore, Gros, Nilges and Read
7refinementCNSBrunger, Adams, Clore, Gros, Nilges and Read
8chemical shift assignmentCARAKeller and Wuthrich