2KUM

Solution structure of the human chemokine CCL27


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC1.05 mM [U-15N] CCL27, 0.1 mM [U-2H] EDTA95% H2O/5% D2O0.45.5ambient298
22D 1H-13C HSQC0.5 mM [U-13C; U-15N] CCL27, 0.1 mM [U-2H] EDTA95% H2O/5% D2O0.45.5ambient298
33D HNCO0.5 mM [U-13C; U-15N] CCL27, 0.1 mM [U-2H] EDTA95% H2O/5% D2O0.45.5ambient298
43D HNCA0.5 mM [U-13C; U-15N] CCL27, 0.1 mM [U-2H] EDTA95% H2O/5% D2O0.45.5ambient298
53D HN(CO)CA0.5 mM [U-13C; U-15N] CCL27, 0.1 mM [U-2H] EDTA95% H2O/5% D2O0.45.5ambient298
63D HNCACB0.5 mM [U-13C; U-15N] CCL27, 0.1 mM [U-2H] EDTA95% H2O/5% D2O0.45.5ambient298
73D HN(COCA)CB0.5 mM [U-13C; U-15N] CCL27, 0.1 mM [U-2H] EDTA95% H2O/5% D2O0.45.5ambient298
83D HN(CA)CO0.5 mM [U-13C; U-15N] CCL27, 0.1 mM [U-2H] EDTA95% H2O/5% D2O0.45.5ambient298
93D intra-HNCA0.5 mM [U-13C; U-15N] CCL27, 0.1 mM [U-2H] EDTA95% H2O/5% D2O0.45.5ambient298
103D (H)NNH-NOESY1.05 mM [U-15N] CCL27, 0.1 mM [U-2H] EDTA95% H2O/5% D2O0.45.5ambient298
113D H(CCO)NH0.5 mM [U-13C; U-15N] CCL27, 0.1 mM [U-2H] EDTA95% H2O/5% D2O0.45.5ambient298
123D C(CO)NH0.5 mM [U-13C; U-15N] CCL27, 0.1 mM [U-2H] EDTA95% H2O/5% D2O0.45.5ambient298
133D HCCH-TOCSY0.5 mM [U-13C; U-15N] CCL27, 0.1 mM [U-2H] EDTA95% H2O/5% D2O0.45.5ambient298
143D 1H-15N TOCSY1.05 mM [U-15N] CCL27, 0.1 mM [U-2H] EDTA95% H2O/5% D2O0.45.5ambient298
153D 1H-13C NOESY0.5 mM [U-13C; U-15N] CCL27, 0.1 mM [U-2H] EDTA95% H2O/5% D2O0.45.5ambient298
162D 1H-1H NOESY1.05 mM [U-15N] CCL27, 0.1 mM [U-2H] EDTA95% H2O/5% D2O0.45.5ambient298
173D Me-H(C)CH-TOCSY0.5 mM [U-13C; U-15N] CCL27, 0.1 mM [U-2H] EDTA95% H2O/5% D2O0.45.5ambient298
183D Me-(H)CCH-TOCSY0.5 mM [U-13C; U-15N] CCL27, 0.1 mM [U-2H] EDTA95% H2O/5% D2O0.45.5ambient298
192D 1H-13C CT-HSQC0.5 mM [U-13C; U-15N] CCL27, 0.1 mM [U-2H] EDTA95% H2O/5% D2O0.45.5ambient298
203D 1H-15N NOESY1.05 mM [U-15N] CCL27, 0.1 mM [U-2H] EDTA95% H2O/5% D2O0.45.5ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDRX500
2BrukerDRX600
3BrukerDRX800
NMR Refinement
MethodDetailsSoftware
simulated annealing, torsion angle dynamics, molecular dynamicsXwinNMR
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number30
Representative Model1 (closest to the average)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionXwinNMR2.6Bruker Biospin
2processingAzara2.7Boucher, W. et al.
3data analysisCcpNmr AnalysisCCPN
4chemical shift assignmentCcpNmr AnalysisCCPN
5peak pickingCcpNmr AnalysisCCPN
6structure solutionARIA1.2Linge, J.P. et al.
7structure solutionCNS1.1Brunger, A. et al.
8refinementCNS1.1Brunger, A. et al.
9data analysisTALOSCornilescu, G. et al.