2KTV | pdb_00002ktv

Human eRF1 C-domain, "open" conformer


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D DQF-COSY1 MM C_ERF1_HUMAN, 50 MM POTASSIUM CHLORIDE, 10 MM POTASSIUM PHOSPHATE90% H2O/10% D2O0.087.0AMBIENT298
22D 1H-15N HSQC0.8 MM [U-99% 15N] C_ERF1_HUMAN, 50 MM POTASSIUM CHLORIDE, 10 MM POTASSIUM PHOSPHATE90% H2O/10% D2O0.087.0AMBIENT298
33D HNCA0.8 MM [U-99% 13C U-99% 15N] C_ERF1_HUMAN, 50 MM POTASSIUM CHLORIDE, 10 MM POTASSIUM PHOSPHATE90% H2O/10% D2O0.087.0AMBIENT298
43D HNCACB0.8 MM [U-99% 13C U-99% 15N] C_ERF1_HUMAN, 50 MM POTASSIUM CHLORIDE, 10 MM POTASSIUM PHOSPHATE90% H2O/10% D2O0.087.0AMBIENT298
53D HN(CO)CA0.8 MM [U-99% 13C U-99% 15N] C_ERF1_HUMAN, 50 MM POTASSIUM CHLORIDE, 10 MM POTASSIUM PHOSPHATE90% H2O/10% D2O0.087.0AMBIENT298
63D CBCA(CO)NH0.8 MM [U-99% 13C U-99% 15N] C_ERF1_HUMAN, 50 MM POTASSIUM CHLORIDE, 10 MM POTASSIUM PHOSPHATE90% H2O/10% D2O0.087.0AMBIENT298
73D HBHA(CO)NH0.8 MM [U-99% 13C U-99% 15N] C_ERF1_HUMAN, 50 MM POTASSIUM CHLORIDE, 10 MM POTASSIUM PHOSPHATE90% H2O/10% D2O0.087.0AMBIENT298
83D HNCO0.8 MM [U-99% 13C U-99% 15N] C_ERF1_HUMAN, 50 MM POTASSIUM CHLORIDE, 10 MM POTASSIUM PHOSPHATE90% H2O/10% D2O0.087.0AMBIENT298
93D HNHA0.8 MM [U-99% 13C U-99% 15N] C_ERF1_HUMAN, 50 MM POTASSIUM CHLORIDE, 10 MM POTASSIUM PHOSPHATE90% H2O/10% D2O0.087.0AMBIENT298
103D 1H-15N NOESY0.8 MM [U-99% 13C U-99% 15N] C_ERF1_HUMAN, 50 MM POTASSIUM CHLORIDE, 10 MM POTASSIUM PHOSPHATE90% H2O/10% D2O0.087.0AMBIENT298
113D 1H-13C NOESY0.8 MM [U-99% 13C U-99% 15N] C_ERF1_HUMAN, 50 MM POTASSIUM CHLORIDE, 10 MM POTASSIUM PHOSPHATE90% H2O/10% D2O0.087.0AMBIENT298
123D HCCH-TOCSY0.8 MM [U-99% 13C U-99% 15N] C_ERF1_HUMAN, 50 MM POTASSIUM CHLORIDE, 10 MM POTASSIUM PHOSPHATE90% H2O/10% D2O0.087.0AMBIENT298
133D HNCA0.8 MM [U-99% 13C U-99% 15N] C_ERF1_HUMAN, 50 MM POTASSIUM CHLORIDE, 10 MM POTASSIUM PHOSPHATE, 100% D2O90% H2O/10% D2O0.087.0AMBIENT298
143D HNCACB0.8 MM [U-99% 13C U-99% 15N] C_ERF1_HUMAN, 50 MM POTASSIUM CHLORIDE, 10 MM POTASSIUM PHOSPHATE, 100% D2O90% H2O/10% D2O0.087.0AMBIENT298
153D HN(CO)CA0.8 MM [U-99% 13C U-99% 15N] C_ERF1_HUMAN, 50 MM POTASSIUM CHLORIDE, 10 MM POTASSIUM PHOSPHATE, 100% D2O90% H2O/10% D2O0.087.0AMBIENT298
163D CBCA(CO)NH0.8 MM [U-99% 13C U-99% 15N] C_ERF1_HUMAN, 50 MM POTASSIUM CHLORIDE, 10 MM POTASSIUM PHOSPHATE, 100% D2O90% H2O/10% D2O0.087.0AMBIENT298
173D HBHA(CO)NH0.8 MM [U-99% 13C U-99% 15N] C_ERF1_HUMAN, 50 MM POTASSIUM CHLORIDE, 10 MM POTASSIUM PHOSPHATE, 100% D2O90% H2O/10% D2O0.087.0AMBIENT298
183D HNCO0.8 MM [U-99% 13C U-99% 15N] C_ERF1_HUMAN, 50 MM POTASSIUM CHLORIDE, 10 MM POTASSIUM PHOSPHATE, 100% D2O90% H2O/10% D2O0.087.0AMBIENT298
193D HNHA0.8 MM [U-99% 13C U-99% 15N] C_ERF1_HUMAN, 50 MM POTASSIUM CHLORIDE, 10 MM POTASSIUM PHOSPHATE, 100% D2O90% H2O/10% D2O0.087.0AMBIENT298
203D 1H-15N NOESY0.8 MM [U-99% 13C U-99% 15N] C_ERF1_HUMAN, 50 MM POTASSIUM CHLORIDE, 10 MM POTASSIUM PHOSPHATE, 100% D2O90% H2O/10% D2O0.087.0AMBIENT298
213D 1H-13C NOESY0.8 MM [U-99% 13C U-99% 15N] C_ERF1_HUMAN, 50 MM POTASSIUM CHLORIDE, 10 MM POTASSIUM PHOSPHATE, 100% D2O90% H2O/10% D2O0.087.0AMBIENT298
223D HCCH-TOCSY0.8 MM [U-99% 13C U-99% 15N] C_ERF1_HUMAN, 50 MM POTASSIUM CHLORIDE, 10 MM POTASSIUM PHOSPHATE, 100% D2O90% H2O/10% D2O0.087.0AMBIENT298
232D 1H-13C HSQC1 MM C_ERF1_ HUMAN, 50 MM POTASSIUM CHLORIDE, 10 MM POTASSIUM PHOSPHATE, 5 % DMPC/DHPC/ SDS90% H2O/10% D2O0.087.0AMBIENT298
243D 1H-15N NOESY0.8 MM [U-99% 13C U-99% 15N] C_ERF1_HUMAN, 50 MM POTASSIUM CHLORIDE, 10 MM POTASSIUM PHOSPHATE90% H2O/10% D2O0.087.0AMBIENT311
253D 1H-13C NOESY0.8 MM [U-99% 13C U-99% 15N] C_ERF1_HUMAN, 50 MM POTASSIUM CHLORIDE, 10 MM POTASSIUM PHOSPHATE90% H2O/10% D2O0.087.0AMBIENT311
263D 1H-15N NOESY0.8 MM [U-99% 13C U-99% 15N] C_ERF1_HUMAN, 50 MM POTASSIUM CHLORIDE, 10 MM POTASSIUM PHOSPHATE, 100% D2O90% H2O/10% D2O0.087.0AMBIENT311
273D 1H-13C NOESY0.8 MM [U-99% 13C U-99% 15N] C_ERF1_HUMAN, 50 MM POTASSIUM CHLORIDE, 10 MM POTASSIUM PHOSPHATE, 100% D2O90% H2O/10% D2O0.087.0AMBIENT311
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE600
2BrukerAVANCE700
3VarianINOVA600
4VarianINOVA800
NMR Refinement
MethodDetailsSoftware
simulated annealingCNS
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations
Conformers Calculated Total Number100
Conformers Submitted Total Number24
Representative Model1 (closest to the average)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementCNS2.1BRUNGER, ADAMS, CLORE, DELANO, GROS, GROSSE- KUNSTLEVE, JIANG, KUSZEWSKI, NILGES, PANNU, READ, RICE, SIMONSON, WARREN
2collectionVNMRVarian
3collectionTopSpinBruker Biospin
4processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
5structure solutionSparkyGoddard
6data analysisTALOSCornilescu, Delaglio and Bax
7data analysisAnglesearch2.10Polshakov VI & Feeney J.
8structure solutionCNS2.1BRUNGER, ADAMS, CLORE, DELANO, GROS, GROSSE- KUNSTLEVE, JIANG, KUSZEWSKI, NILGES, PANNU, READ, RICE, SIMONSON, WARREN
9structure solutionARIALinge, O'Donoghue and Nilges
10structure solutionCNSSOLVEBrunger, Adams, Clore, Gros, Nilges and Read