2KSG

Solution structure of dermcidin-1L, a human antibiotic peptide


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC50% [U-99% 2H] TFE-1, 10% [U-99% 2H] D2O-2, 40% H2O-3trifluoroethanol/water4.2ambient298
23D 1H-15N NOESY50% [U-99% 2H] TFE-1, 10% [U-99% 2H] D2O-2, 40% H2O-3trifluoroethanol/water4.2ambient298
33D 1H-15N TOCSY50% [U-99% 2H] TFE-1, 10% [U-99% 2H] D2O-2, 40% H2O-3trifluoroethanol/water4.2ambient298
43D HNHA50% [U-99% 2H] TFE-1, 10% [U-99% 2H] D2O-2, 40% H2O-3trifluoroethanol/water4.2ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE600
NMR Refinement
MethodDetailsSoftware
DGSA-distance geometry simulated annealingCNS
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number20
Conformers Submitted Total Number20
Representative Model1 (closest to the average)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementCNSBrunger A. T. et.al.
2structure solutionCYANA2.1Guntert, Mumenthaler and Wuthrich