2KPO

Solution NMR structure of de novo designed rossmann 2x2 fold protein, Northeast Structural Genomics Consortium target OR16


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC0.859 mM [U-100% 13C; U-100% 15N] protein93% H2O/7% D2O2006.5ambient298
22D 1H-13C HSQC0.867 mM [U-10% 13C; U-100% 15N] protein93% H2O/7% D2O2006.5ambient298
33D CBCA(CO)NH0.859 mM [U-100% 13C; U-100% 15N] protein93% H2O/7% D2O2006.5ambient298
43D HNCACB0.859 mM [U-100% 13C; U-100% 15N] protein93% H2O/7% D2O2006.5ambient298
53D H(CCO)NH0.859 mM [U-100% 13C; U-100% 15N] protein93% H2O/7% D2O2006.5ambient298
6GFT (4,3)D HABCABcoNHN0.859 mM [U-100% 13C; U-100% 15N] protein93% H2O/7% D2O2006.5ambient298
7SIMUTANEOUS 1H, 15N, 13C NOESY0.859 mM [U-100% 13C; U-100% 15N] protein93% H2O/7% D2O2006.5ambient298
83D CCHTOCSY0.859 mM [U-100% 13C; U-100% 15N] protein93% H2O/7% D2O2006.5ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE800
2VarianINOVA600
NMR Refinement
MethodDetailsSoftware
distance geometry, simulated annealing, molecular dynamics, torsion angle dynamicsCNS
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementCNSBrunger, Adams, Clore, Gros, Nilges and Read
2structure solutionCNSBrunger, Adams, Clore, Gros, Nilges and Read
3geometry optimizationCNSBrunger, Adams, Clore, Gros, Nilges and Read
4refinementCYANAGuntert, Mumenthaler and Wuthrich
5structure solutionCYANAGuntert, Mumenthaler and Wuthrich
6geometry optimizationCYANAGuntert, Mumenthaler and Wuthrich
7refinementAutoStructureHuang, Tejero, Powers and Montelione
8data analysisAutoStructureHuang, Tejero, Powers and Montelione
9geometry optimizationAutoStructureHuang, Tejero, Powers and Montelione
10chemical shift assignmentXEASYBartels et al.
11data analysisXEASYBartels et al.
12peak pickingXEASYBartels et al.
13collectionTopSpinBruker Biospin
14processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
15collectionVnmrJVarian
16chemical shift assignmentAutoAssignZimmerman, Moseley, Kulikowski and Montelione