2K6A
Solution structure of EAS D15 truncation mutant
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-1H NOESY | 0.3-0.5 mM EAS_D15, 20 mM sodium phosphate | 95% H2O/5% D2O | 20 | 6.2 | ambient | 298 | |
2 | 2D 1H-1H TOCSY | 0.3-0.5 mM EAS_D15, 20 mM sodium phosphate | 95% H2O/5% D2O | 20 | 6.2 | ambient | 298 | |
3 | 2D DQF-COSY | 0.3-0.5 mM EAS_D15, 20 mM sodium phosphate | 95% H2O/5% D2O | 20 | 6.2 | ambient | 298 | |
4 | 2D 1H-15N HSQC | 0.1-0.3 mM [U-99% 15N] EAS_D15, 20 mM sodium acetate | 95% H2O/5% D2O | 20 | 6.2 | ambient | 298 | |
5 | 3D 1H-15N NOESY | 0.1-0.3 mM [U-99% 15N] EAS_D15, 20 mM sodium acetate | 95% H2O/5% D2O | 20 | 6.2 | ambient | 298 | |
6 | 3D HNHA | 0.1-0.3 mM [U-99% 15N] EAS_D15, 20 mM sodium acetate | 95% H2O/5% D2O | 20 | 6.2 | ambient | 298 | |
7 | 3D HNHB | 0.1-0.3 mM [U-99% 15N] EAS_D15, 20 mM sodium acetate | 95% H2O/5% D2O | 20 | 6.2 | ambient | 298 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DRX | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing, torsion angle dynamics, molecular dynamics | TopSpin |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 500 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | collection | TopSpin | 1.3 | Bruker Biospin |
2 | processing | TopSpin | 1.3 | Bruker Biospin |
3 | collection | XwinNMR | Bruker Biospin | |
4 | chemical shift assignment | Sparky | 3.113 | Goddard |
5 | chemical shift calculation | Sparky | 3.113 | Goddard |
6 | data analysis | Sparky | 3.113 | Goddard |
7 | peak picking | Sparky | 3.113 | Goddard |
8 | structure solution | CNS/Aria1.2 | 1.2 | Linge, O'Donoghue and Nilges |
9 | refinement | CNS/Aria1.2 | 1.2 | Linge, O'Donoghue and Nilges |