2K2B

Sparse-constraint solution NMR structure of micelle-solublized cytosolic amino terminal domain of C. elegans mechanosensory ion channel subunit MEC-4. New York Consortium on Membrane Protein Structure (NYCOMPS)


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC1.5 mM [U-100% 13C; U-100% 15N; 100% 2H; ILV methyl 1H; FY ring 1H] MEC4, 25 mM sodium phosphate, 5 mM Zwittergent 3-12, 25 mM sodium chloride, 5 mM TCEP95% H2O/5% D2O0.0256.8ambient300
23D HNCO1.5 mM [U-100% 13C; U-100% 15N; 100% 2H; ILV methyl 1H; FY ring 1H] MEC4, 25 mM sodium phosphate, 5 mM Zwittergent 3-12, 25 mM sodium chloride, 5 mM TCEP95% H2O/5% D2O0.0256.8ambient300
33D HNCA1.5 mM [U-100% 13C; U-100% 15N; 100% 2H; ILV methyl 1H; FY ring 1H] MEC4, 25 mM sodium phosphate, 5 mM Zwittergent 3-12, 25 mM sodium chloride, 5 mM TCEP95% H2O/5% D2O0.0256.8ambient300
43D HN(CO)CA1.5 mM [U-100% 13C; U-100% 15N; 100% 2H; ILV methyl 1H; FY ring 1H] MEC4, 25 mM sodium phosphate, 5 mM Zwittergent 3-12, 25 mM sodium chloride, 5 mM TCEP95% H2O/5% D2O0.0256.8ambient300
53D HCACO1.5 mM [U-100% 13C; U-100% 15N; 100% 2H; ILV methyl 1H; FY ring 1H] MEC4, 25 mM sodium phosphate, 5 mM Zwittergent 3-12, 25 mM sodium chloride, 5 mM TCEP95% H2O/5% D2O0.0256.8ambient300
62D 1H-1H NOESY1.5 mM [U-100% 13C; U-100% 15N; 100% 2H; ILV methyl 1H; FY ring 1H] MEC4, 25 mM sodium phosphate, 5 mM Zwittergent 3-12, 25 mM sodium chloride, 5 mM TCEP95% H2O/5% D2O0.0256.8ambient300
73D 1H-15N NOESY1.5 mM [U-100% 13C; U-100% 15N; 100% 2H; ILV methyl 1H; FY ring 1H] MEC4, 25 mM sodium phosphate, 5 mM Zwittergent 3-12, 25 mM sodium chloride, 5 mM TCEP95% H2O/5% D2O0.0256.8ambient300
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE800
NMR Refinement
MethodDetailsSoftware
simulated annealingexplicit water refinementCYANA
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number250
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementCYANA1.0.6Guntert, Mumenthaler and Wuthrich
2processingAutoAssign2.4.0Zimmerman, Moseley, Kulikowski and Montelione
3structure solutionCNS1.2Brunger, Adams, Clore, Gros, Nilges and Read
4data analysisSparky3.110Goddard