2JQK | pdb_00002jqk

VPS4B MIT-CHMP2B Complex

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	0.48 mM [U-100% 13C; U-100% 15N] VPS4B MIT, 4.8 mM CHMP2B(195-213)	90% H2O/10% D2O	50	5.65	ambient	298
2	2D 1H-13C HSQC	0.48 mM [U-100% 13C; U-100% 15N] VPS4B MIT, 4.8 mM CHMP2B(195-213)	90% H2O/10% D2O	50	5.65	ambient	298
3	3D HNCACB	0.48 mM [U-100% 13C; U-100% 15N] VPS4B MIT, 4.8 mM CHMP2B(195-213)	90% H2O/10% D2O	50	5.65	ambient	298
4	3D CBCA(CO)NH	0.48 mM [U-100% 13C; U-100% 15N] VPS4B MIT, 4.8 mM CHMP2B(195-213)	90% H2O/10% D2O	50	5.65	ambient	298
5	3D HBHA(CO)NH	0.48 mM [U-100% 13C; U-100% 15N] VPS4B MIT, 4.8 mM CHMP2B(195-213)	90% H2O/10% D2O	50	5.65	ambient	298
6	3D HNHA	0.48 mM [U-100% 13C; U-100% 15N] VPS4B MIT, 4.8 mM CHMP2B(195-213)	90% H2O/10% D2O	50	5.65	ambient	298
7	3D C(CO)NH	0.48 mM [U-100% 13C; U-100% 15N] VPS4B MIT, 4.8 mM CHMP2B(195-213)	90% H2O/10% D2O	50	5.65	ambient	298
8	3D H(CCO)NH	0.48 mM [U-100% 13C; U-100% 15N] VPS4B MIT, 4.8 mM CHMP2B(195-213)	90% H2O/10% D2O	50	5.65	ambient	298
9	3D HCCH-COSY	0.48 mM [U-100% 13C; U-100% 15N] VPS4B MIT, 4.8 mM CHMP2B(195-213)	90% H2O/10% D2O	50	5.65	ambient	298
10	3D HCCH-TOCSY	0.48 mM [U-100% 13C; U-100% 15N] VPS4B MIT, 4.8 mM CHMP2B(195-213)	90% H2O/10% D2O	50	5.65	ambient	298
11	3D 1H-13C NOESY	0.48 mM [U-100% 13C; U-100% 15N] VPS4B MIT, 4.8 mM CHMP2B(195-213)	90% H2O/10% D2O	50	5.65	ambient	298
12	3D 1H-15N NOESY	0.48 mM [U-100% 13C; U-100% 15N] VPS4B MIT, 4.8 mM CHMP2B(195-213)	90% H2O/10% D2O	50	5.65	ambient	298
13	2D 1H-15N HSQC	2.84 mM VPS4B MIT, 0.26 mM [U-100% 13C; U-100% 15N] CHMP2B(195-213)	90% H2O/10% D2O	50	5.65	ambient	298
14	2D 1H-13C HSQC	2.84 mM VPS4B MIT, 0.26 mM [U-100% 13C; U-100% 15N] CHMP2B(195-213)	90% H2O/10% D2O	50	5.65	ambient	298
15	3D HNCACB	2.84 mM VPS4B MIT, 0.26 mM [U-100% 13C; U-100% 15N] CHMP2B(195-213)	90% H2O/10% D2O	50	5.65	ambient	298
16	3D CBCA(CO)NH	2.84 mM VPS4B MIT, 0.26 mM [U-100% 13C; U-100% 15N] CHMP2B(195-213)	90% H2O/10% D2O	50	5.65	ambient	298
17	3D HBHA(CO)NH	2.84 mM VPS4B MIT, 0.26 mM [U-100% 13C; U-100% 15N] CHMP2B(195-213)	90% H2O/10% D2O	50	5.65	ambient	298
18	3D HNHA	2.84 mM VPS4B MIT, 0.26 mM [U-100% 13C; U-100% 15N] CHMP2B(195-213)	90% H2O/10% D2O	50	5.65	ambient	298
19	3D C(CO)NH	2.84 mM VPS4B MIT, 0.26 mM [U-100% 13C; U-100% 15N] CHMP2B(195-213)	90% H2O/10% D2O	50	5.65	ambient	298
20	3D H(CCO)NH	2.84 mM VPS4B MIT, 0.26 mM [U-100% 13C; U-100% 15N] CHMP2B(195-213)	90% H2O/10% D2O	50	5.65	ambient	298
21	3D HCCH-COSY	2.84 mM VPS4B MIT, 0.26 mM [U-100% 13C; U-100% 15N] CHMP2B(195-213)	90% H2O/10% D2O	50	5.65	ambient	298
22	3D HCCH-TOCSY	2.84 mM VPS4B MIT, 0.26 mM [U-100% 13C; U-100% 15N] CHMP2B(195-213)	90% H2O/10% D2O	50	5.65	ambient	298
23	3D 1H-13C NOESY	2.84 mM VPS4B MIT, 0.26 mM [U-100% 13C; U-100% 15N] CHMP2B(195-213)	90% H2O/10% D2O	50	5.65	ambient	298
24	3D 1H-15N NOESY	2.84 mM VPS4B MIT, 0.26 mM [U-100% 13C; U-100% 15N] CHMP2B(195-213)	90% H2O/10% D2O	50	5.65	ambient	298

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Varian	INOVA	600

NMR Refinement
Method	Details	Software
simulated annealing	Refinement using anneal.inp and using summed NOE constraints with max T of 3000 K for simulated annealing.	Felix

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	200
Conformers Submitted Total Number	20
Representative Model	1 (lowest energy)

Additional NMR Experimental Information
Details	Half-filtered NOESYs provided the intermolecular NOEs

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	processing	Felix	2004	Accelrys Software Inc.
2	chemical shift assignment	Sparky	3.112	Goddard
3	peak picking	Sparky	3.112	Goddard
4	data analysis	Sparky	3.112	Goddard
5	structure solution	CYANA	2.1	Guntert, Mumenthaler and Wuthrich
6	refinement	CNS	1.2	Brunger, Adams, Clore, Gros, Nilges and Read