2JNB

Solution Structure of RNA-binding protein 15.5K


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC0.1 % sodium azide, 200 mM sodium chloride, 50 mM sodium phosphate, 0.9 mM [U-98% 13C, U-98% 15N] protein, 90% H2O, 10% D2O90% H2O/10% D2O2506.0ambient293
23D CBCA(CO)NH0.1 % sodium azide, 200 mM sodium chloride, 50 mM sodium phosphate, 0.9 mM [U-98% 13C, U-98% 15N] protein, 90% H2O, 10% D2O90% H2O/10% D2O2506.0ambient293
33D HNCO0.1 % sodium azide, 200 mM sodium chloride, 50 mM sodium phosphate, 0.9 mM [U-98% 13C, U-98% 15N] protein, 90% H2O, 10% D2O90% H2O/10% D2O2506.0ambient293
43D HNCA0.1 % sodium azide, 200 mM sodium chloride, 50 mM sodium phosphate, 0.9 mM [U-98% 13C, U-98% 15N] protein, 90% H2O, 10% D2O90% H2O/10% D2O2506.0ambient293
53D HNCACB0.1 % sodium azide, 200 mM sodium chloride, 50 mM sodium phosphate, 0.9 mM [U-98% 13C, U-98% 15N] protein, 90% H2O, 10% D2O90% H2O/10% D2O2506.0ambient293
63D HN(CO)CA0.1 % sodium azide, 200 mM sodium chloride, 50 mM sodium phosphate, 0.9 mM [U-98% 13C, U-98% 15N] protein, 90% H2O, 10% D2O90% H2O/10% D2O2506.0ambient293
72D 1H-13C HSQC0.1 % sodium azide, 100 mM sodium chloride, 100 mM sodium phosphate, 1.6 mM protein, 90% H2O, 10% D2O90% H2O/10% D2O2006.0ambient293
83D C(CO)NH0.1 % sodium azide, 100 mM sodium chloride, 100 mM sodium phosphate, 1.6 mM protein, 90% H2O, 10% D2O90% H2O/10% D2O2006.0ambient293
93D HBHA(CO)NH0.1 % sodium azide, 100 mM sodium chloride, 100 mM sodium phosphate, 1.6 mM protein, 90% H2O, 10% D2O90% H2O/10% D2O2006.0ambient293
103D HCCH-TOCSY0.1 % sodium azide, 100 mM sodium chloride, 100 mM sodium phosphate, 1.6 mM protein, 90% H2O, 10% D2O90% H2O/10% D2O2006.0ambient293
113D HCCH-COSY0.1 % sodium azide, 100 mM sodium chloride, 100 mM sodium phosphate, 1.6 mM protein, 90% H2O, 10% D2O90% H2O/10% D2O2006.0ambient293
123D 1H-15N NOESY0.1 % sodium azide, 100 mM sodium chloride, 100 mM sodium phosphate, 1.6 mM protein, 90% H2O, 10% D2O90% H2O/10% D2O2006.0ambient293
133D 1H-13C NOESY0.1 % sodium azide, 100 mM sodium chloride, 100 mM sodium phosphate, 1.6 mM protein, 90% H2O, 10% D2O90% H2O/10% D2O2006.0ambient293
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA600
2VarianINOVA800
NMR Refinement
MethodDetailsSoftware
simulated annealingFelix
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (fewest violations)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingFelix97.0Accelrys Software Inc.
2chemical shift assignmentSPARKY3.111Goddard
3peak pickingSPARKY3.111Goddard
4data analysisTALOSCornilescu, Delaglio and Bax
5structure solutionCYANA2.1Guntert, Mumenthaler and Wuthrich
6data analysisProcheckNMRLaskowski and MacArthur
7refinementCYANA2.1Guntert, Mumenthaler and Wuthrich