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CRYSTAL STRUCTURE OF SOCS-4 IN COMPLEX WITH ELONGIN-B AND ELONGIN-C AT 2.55A RESOLUTION
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2C9W PDB ENTRY 2C9W
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 150 UL SITTING DROP 2M NACL 10% PEK6K
Crystal Properties Matthews coefficient Solvent content 3.98 69
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 154.77 α = 90 b = 154.77 β = 90 c = 67.909 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH MIRRORS 2006-06-16 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X10SA SLS X10SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.55 44.68 99.7 0.13 9.14 2.71 19724 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.55 2.65 97.2 0.36 1.98 1.72
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 2C9W 2.55 77.38 18723 1000 99.7 0.175 0.172 0.1736 0.223 0.2234 RANDOM 25.83
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.22 -0.61 -1.22 1.83
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.785 r_dihedral_angle_4_deg 18.092 r_dihedral_angle_3_deg 16.155 r_scangle_it 8.759 r_scbond_it 7.002 r_dihedral_angle_1_deg 6.553 r_mcangle_it 5.295 r_mcbond_it 3.518 r_angle_refined_deg 1.438 r_angle_other_deg 1.006
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.785 r_dihedral_angle_4_deg 18.092 r_dihedral_angle_3_deg 16.155 r_scangle_it 8.759 r_scbond_it 7.002 r_dihedral_angle_1_deg 6.553 r_mcangle_it 5.295 r_mcbond_it 3.518 r_angle_refined_deg 1.438 r_angle_other_deg 1.006 r_symmetry_vdw_other 0.217 r_nbd_refined 0.2 r_nbd_other 0.19 r_nbtor_refined 0.188 r_symmetry_vdw_refined 0.162 r_xyhbond_nbd_refined 0.159 r_chiral_restr 0.144 r_symmetry_hbond_refined 0.135 r_nbtor_other 0.089 r_bond_refined_d 0.013 r_gen_planes_refined 0.005 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2806 Nucleic Acid Atoms Solvent Atoms 113 Heterogen Atoms 6
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction SCALA data scaling PHASER phasing